POLR2I 32615

Name: POLR2I	Sequence: fasta or formatted (125aa)		NCBI GI: 5453930
Description: DNA directed RNA polymerase II polypeptide I		Referenced in: RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 8 1 C cysteine 7.2 9 1 D aspartate 7.2 9 1 E glutamate 9.6 12 1 F phenylalanine 3.2 4 2 G glycine 4.0 5 1 H histidine 4.8 6 1 I isoleucine 4.8 6 2 K lysine 4.0 5 1 L leucine 4.8 6 2 M methionine 2.4 3 1 N asparagine 4.8 6 2 P proline 5.6 7 1 Q glutamine 5.6 7 2 R arginine 5.6 7 1 S serine 3.2 4 1 T threonine 5.6 7 1 V valine 4.8 6 1 W tryptophan 0.8 1 1 Y tyrosine 5.6 7 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 DNA directed RNA polymerase II polypeptide I POLR3K 0.116 DNA directed RNA polymerase III polypeptide K ZNRD1 0.032 zinc ribbon domain containing 1 ZNRD1 0.032 zinc ribbon domain containing 1 LOC100289899 0.028 PREDICTED: hypothetical protein XP_002347041 TCEA1 0.028 transcription elongation factor A 1 isoform 1 TCEA1 0.028 transcription elongation factor A 1 isoform 2 TCEA2 0.024 transcription elongation factor A protein 2 isoform ... TCEA2 0.024 transcription elongation factor A protein 2 isoform a... RIMS1 0.020 regulating synaptic membrane exocytosis 1 AP4B1 0.012 adaptor-related protein complex 4, beta 1 subunit [... FLJ35848 0.012 hypothetical protein LOC284071 ZNF76 0.012 zinc finger protein 76 (expressed in testis) NR4A2 0.008 nuclear receptor subfamily 4, group A, member 2 [Homo... LOC100293442 0.008 PREDICTED: hypothetical protein NR4A3 0.008 nuclear receptor subfamily 4, group A, member 3 isof... NR4A3 0.008 nuclear receptor subfamily 4, group A, member 3 isof... NR4A3 0.008 nuclear receptor subfamily 4, group A, member 3 isof... NR4A3 0.008 nuclear receptor subfamily 4, group A, member 3 isof... SSSCA1 0.008 Sjogren syndrome/scleroderma autoantigen 1 MED13 0.008 mediator complex subunit 13 KPNA3 0.008 karyopherin alpha 3 CHCHD4 0.008 coiled-coil-helix-coiled-coil-helix domain containi... B4GALT3 0.004 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 3 ... KPNA4 0.004 karyopherin alpha 4 CKAP2 0.004 cytoskeleton associated protein 2 isoform 2 CKAP2 0.004 cytoskeleton associated protein 2 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.