Search of human proteins with 53828926

Search of human proteins with 53828926

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|53828926 early B-cell factor 3 [Homo sapiens]
         (551 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|53828926 early B-cell factor 3 [Homo sapiens]                     1124   0.0  
gi|31415878 early B-cell factor [Homo sapiens]                        993   0.0  
gi|113930703 early B-cell factor 2 [Homo sapiens]                     951   0.0  
gi|160333411 early B-cell factor 4 [Homo sapiens]                     847   0.0  
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]                  36   0.10 
gi|5454064 RNA binding motif protein 14 [Homo sapiens]                 35   0.14 
gi|119829187 alpha 1 type XVII collagen [Homo sapiens]                 35   0.18 
gi|190343021 Sec24-related protein D [Homo sapiens]                    34   0.30 
gi|86991432 GLI-Kruppel family member GLI2 [Homo sapiens]              33   0.52 
gi|83367077 mucin 16 [Homo sapiens]                                    33   0.52 
gi|126116589 fibrocystin L [Homo sapiens]                              33   0.52 
gi|239744758 PREDICTED: hypothetical protein XP_002343261 [Homo ...    33   0.68 
gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma...    33   0.89 
gi|66528642 nuclear receptor subfamily 3, group C, member 1 isof...    32   1.2  
gi|66528611 nuclear receptor subfamily 3, group C, member 1 isof...    32   1.2  
gi|66528586 nuclear receptor subfamily 3, group C, member 1 isof...    32   1.2  
gi|66528563 nuclear receptor subfamily 3, group C, member 1 isof...    32   1.2  
gi|66528530 nuclear receptor subfamily 3, group C, member 1 isof...    32   1.2  
gi|4504133 nuclear receptor subfamily 3, group C, member 1 isofo...    32   1.2  
gi|66528677 nuclear receptor subfamily 3, group C, member 1 isof...    32   1.2  
gi|21536357 TBP-associated factor 6 isoform delta [Homo sapiens]       32   1.2  
gi|21536355 TBP-associated factor 6 isoform gamma [Homo sapiens]       32   1.2  
gi|5032147 TBP-associated factor 6 isoform alpha [Homo sapiens]        32   1.2  
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]         32   1.2  
gi|21536359 TBP-associated factor 6 isoform alpha [Homo sapiens]       32   1.2  
gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Ho...    32   1.2  
gi|110611233 alpha 1 type XVIII collagen isoform 2 precursor [Ho...    32   1.2  
gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Ho...    32   1.2  
gi|89276766 trophinin isoform 5 [Homo sapiens]                         32   1.5  
gi|12707580 paired-like homeobox 2b [Homo sapiens]                     32   1.5  

>gi|53828926 early B-cell factor 3 [Homo sapiens]
          Length = 551

 Score = 1124 bits (2907), Expect = 0.0
 Identities = 551/551 (100%), Positives = 551/551 (100%)

Query: 1   MFGIQENIPRGGTTMKEEPLGSGMNPVRSWMHTAGVVDANTAAQSGVGLARAHFEKQPPS 60
           MFGIQENIPRGGTTMKEEPLGSGMNPVRSWMHTAGVVDANTAAQSGVGLARAHFEKQPPS
Sbjct: 1   MFGIQENIPRGGTTMKEEPLGSGMNPVRSWMHTAGVVDANTAAQSGVGLARAHFEKQPPS 60

Query: 61  NLRKSNFFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPNNEKTNNGIHYKLQLLYSNGV 120
           NLRKSNFFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPNNEKTNNGIHYKLQLLYSNGV
Sbjct: 61  NLRKSNFFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPNNEKTNNGIHYKLQLLYSNGV 120

Query: 121 RTEQDLYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP 180
           RTEQDLYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
Sbjct: 121 RTEQDLYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP 180

Query: 181 VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKH 240
           VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKH
Sbjct: 181 VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKH 240

Query: 241 GRRARRLDPSEATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPH 300
           GRRARRLDPSEATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPH
Sbjct: 241 GRRARRLDPSEATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPH 300

Query: 301 AIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPG 360
           AIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPG
Sbjct: 301 AIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPG 360

Query: 361 DPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPTLGNNP 420
           DPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPTLGNNP
Sbjct: 361 DPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPTLGNNP 420

Query: 421 AHTGMMGVNSFSSQLAVNVSETSQANDQVGYSRNTSSVSPRGYVPSSTPQQSNYNTVSTS 480
           AHTGMMGVNSFSSQLAVNVSETSQANDQVGYSRNTSSVSPRGYVPSSTPQQSNYNTVSTS
Sbjct: 421 AHTGMMGVNSFSSQLAVNVSETSQANDQVGYSRNTSSVSPRGYVPSSTPQQSNYNTVSTS 480

Query: 481 MNGYGSGAMASLGVPGSPGFLNGSSANSPYGMKQKSAFAPVVRPQASPPPSCTSANGNGL 540
           MNGYGSGAMASLGVPGSPGFLNGSSANSPYGMKQKSAFAPVVRPQASPPPSCTSANGNGL
Sbjct: 481 MNGYGSGAMASLGVPGSPGFLNGSSANSPYGMKQKSAFAPVVRPQASPPPSCTSANGNGL 540

Query: 541 QAMSGLVVPPM 551
           QAMSGLVVPPM
Sbjct: 541 QAMSGLVVPPM 551


>gi|31415878 early B-cell factor [Homo sapiens]
          Length = 591

 Score =  993 bits (2568), Expect = 0.0
 Identities = 495/594 (83%), Positives = 523/594 (88%), Gaps = 46/594 (7%)

Query: 1   MFGIQENIPRGGTTMKEEPLGSGMNPVRSWMHTAGVVDANTAAQSGVGLARAHFEKQPPS 60
           MFGIQE+I R G++MKEEPLGSGMN VR+WM  AGV+DANTAAQSGVGLARAHFEKQPPS
Sbjct: 1   MFGIQESIQRSGSSMKEEPLGSGMNAVRTWMQGAGVLDANTAAQSGVGLARAHFEKQPPS 60

Query: 61  NLRKSNFFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPNNEKTNNGIHYKLQLLYSNGV 120
           NLRKSNFFHFVLALYDRQGQPVEIERTAFV FVEKEKE N+EKTNNGIHY+LQLLYSNG+
Sbjct: 61  NLRKSNFFHFVLALYDRQGQPVEIERTAFVGFVEKEKEANSEKTNNGIHYRLQLLYSNGI 120

Query: 121 RTEQDLYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP 180
           RTEQD YVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
Sbjct: 121 RTEQDFYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP 180

Query: 181 VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKH 240
           VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKH
Sbjct: 181 VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKH 240

Query: 241 GRRARRLDPSE--------ATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLV 292
           GRRARRLDPSE        ATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQV+FGTMLV
Sbjct: 241 GRRARRLDPSEGTPSYLEHATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTMLV 300

Query: 293 WSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQ 352
           WSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKG PGRF+YTALNEPTIDYGFQRLQ
Sbjct: 301 WSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRLQ 360

Query: 353 KVIPRHPGDPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQ 412
           KVIPRHPGDPERLPKEV+LKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQ
Sbjct: 361 KVIPRHPGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQ 420

Query: 413 IPTLGNNPAHTGMMGVNSFSSQLAVNVSETSQANDQVGYSRNTSSVSPRGYVPSSTPQQS 472
           +P L N   H GMMGVNSFS QLAVNVSE SQA +Q G++RN+SSVSP GYVPS+TPQQ+
Sbjct: 421 LPALANTSVHAGMMGVNSFSGQLAVNVSEASQATNQ-GFTRNSSSVSPHGYVPSTTPQQT 479

Query: 473 NYNTVSTSMNGYGSGAMASLGVPGSPGFLNGSSANSPYGM-------------------- 512
           NYN+V+TSMNGYGS AM++LG  GSP FLNGS+ANSPY +                    
Sbjct: 480 NYNSVTTSMNGYGSAAMSNLG--GSPTFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSS 537

Query: 513 ---------------KQKSAFAPVVRPQASPPPSCTSANGNGLQAMSGLVVPPM 551
                          KQKSAFAPVVRPQ SPPP+CTS NGN LQA+SG++VPPM
Sbjct: 538 SGIFSFSPANMVSAVKQKSAFAPVVRPQTSPPPTCTSTNGNSLQAISGMIVPPM 591


>gi|113930703 early B-cell factor 2 [Homo sapiens]
          Length = 575

 Score =  951 bits (2457), Expect = 0.0
 Identities = 468/577 (81%), Positives = 507/577 (87%), Gaps = 28/577 (4%)

Query: 1   MFGIQENIPRGGTTMKEEPLGSGMNPVRSWMHTAGVVDANTAAQSGVGLARAHFEKQPPS 60
           MFGIQ+ + RG  T+KE+ LG+ M+ VRSW+   GVVDAN AAQSGV L+RAHFEKQPPS
Sbjct: 1   MFGIQDTLGRG-PTLKEKSLGAEMDSVRSWVRNVGVVDANVAAQSGVALSRAHFEKQPPS 59

Query: 61  NLRKSNFFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPNNEKTNNGIHYKLQLLYSNGV 120
           NLRKSNFFHFVLALYDRQGQPVEIERTAFVDFVE +KE  NEKTNNG HYKLQLLYSNGV
Sbjct: 60  NLRKSNFFHFVLALYDRQGQPVEIERTAFVDFVENDKEQGNEKTNNGTHYKLQLLYSNGV 119

Query: 121 RTEQDLYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP 180
           RTEQDLYVRLIDS+TKQ I YEGQ+KNPEMCRVLLTHE+MCSRCC+KKSCGNRNETPSDP
Sbjct: 120 RTEQDLYVRLIDSVTKQPIAYEGQNKNPEMCRVLLTHEVMCSRCCEKKSCGNRNETPSDP 179

Query: 181 VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKH 240
           VIIDRFFLKFFLKCNQNCLK AGNPRDMRRFQVV+STTVNVDGHVLAVSDNMFVHNNSKH
Sbjct: 180 VIIDRFFLKFFLKCNQNCLKTAGNPRDMRRFQVVLSTTVNVDGHVLAVSDNMFVHNNSKH 239

Query: 241 GRRARRLDPSEATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPH 300
           GRRARRLDPSEATPCIKAISPSEGWTTGGA VIIIGDNFFDGLQVVFGTMLVWSELITPH
Sbjct: 240 GRRARRLDPSEATPCIKAISPSEGWTTGGAMVIIIGDNFFDGLQVVFGTMLVWSELITPH 299

Query: 301 AIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPG 360
           AIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRF+YTALNEPTIDYGFQRLQKVIPRHPG
Sbjct: 300 AIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFIYTALNEPTIDYGFQRLQKVIPRHPG 359

Query: 361 DPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPTLGNNP 420
           DPERL KE+LLKRAADLVEALYG PHNNQ+IILKRAADIAEALYSVPRN +Q+P L ++P
Sbjct: 360 DPERLAKEMLLKRAADLVEALYGTPHNNQDIILKRAADIAEALYSVPRNPSQLPALSSSP 419

Query: 421 AHTGMMGVNSFSSQLAVNVSETSQANDQVGYSRNTSSVSPRGYVPSSTPQQSNYNTVSTS 480
           AH+GMMG+NS+ SQL V++SE++Q N+Q GY RNTSS+SPRGY  SSTPQQSNY+T S S
Sbjct: 420 AHSGMMGINSYGSQLGVSISESTQGNNQ-GYIRNTSSISPRGYSSSSTPQQSNYSTSSNS 478

Query: 481 MNGYGSGAMASLGVPGSPGFLNGSSANSPYG--------------------------MKQ 514
           MNGY +  MA+LGVPGSPGFLNGS   SPYG                          +KQ
Sbjct: 479 MNGYSNVPMANLGVPGSPGFLNGSPTGSPYGIMSSSPTVGSSSTSSILPFSSSVFPAVKQ 538

Query: 515 KSAFAPVVRPQASPPPSCTSANGNGLQAMSGLVVPPM 551
           KSAFAPV+RPQ SP P+C+S NGNG +AM+GLVVPPM
Sbjct: 539 KSAFAPVIRPQGSPSPACSSGNGNGFRAMTGLVVPPM 575


>gi|160333411 early B-cell factor 4 [Homo sapiens]
          Length = 598

 Score =  847 bits (2189), Expect = 0.0
 Identities = 420/576 (72%), Positives = 473/576 (82%), Gaps = 40/576 (6%)

Query: 8   IPRGGTTMKEEPL-GSGMNPVRSWMHTAGVVDANTAAQSGVGLARAHFEKQPPSNLRKSN 66
           +PR G  +KEEPL  +G+  VRSWM  AG++DA+TAAQSGVGLARAHFEKQPPSNLRKSN
Sbjct: 4   LPRSGLNLKEEPLLPAGLGSVRSWMQGAGILDASTAAQSGVGLARAHFEKQPPSNLRKSN 63

Query: 67  FFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPNNEKTNNGIHYKLQLLYSNGVRTEQDL 126
           FFHFVLA+YDRQGQPVE+ERTAF+DFVEK++EP  EKTNNGIHY+L+L+Y+NG+RTEQDL
Sbjct: 64  FFHFVLAMYDRQGQPVEVERTAFIDFVEKDREPGAEKTNNGIHYRLRLVYNNGLRTEQDL 123

Query: 127 YVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRF 186
           YVRLIDSM+KQAI+YEGQDKNPEMCRVLLTHEIMCSRCCD+KSCGNRNETPSDPVIIDRF
Sbjct: 124 YVRLIDSMSKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDRKSCGNRNETPSDPVIIDRF 183

Query: 187 FLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARR 246
           FLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTV+VDGHVLAVSDNMFVHNNSKHGRRARR
Sbjct: 184 FLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSKHGRRARR 243

Query: 247 LDPSE-ATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPHAIRVQ 305
           LDPSE ATPCIKAISP EGWTTGGATVI+IGDNFFDGLQVVFG +LVWSELITPHAIRVQ
Sbjct: 244 LDPSEAATPCIKAISPGEGWTTGGATVIVIGDNFFDGLQVVFGNVLVWSELITPHAIRVQ 303

Query: 306 TPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERL 365
           TPPRHIPGVVEVTLSYKSKQFCKG PGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERL
Sbjct: 304 TPPRHIPGVVEVTLSYKSKQFCKGCPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERL 363

Query: 366 PKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPTLGNNPAHTGM 425
           PKEVLLKRAADL EALYG+P +NQE++LKRAAD+AEALYS PR    +  L  +  H  +
Sbjct: 364 PKEVLLKRAADLAEALYGVPGSNQELLLKRAADVAEALYSTPRAPGPLAPLAPSHPHPAV 423

Query: 426 MGVNSFSSQLAVNVSETSQANDQVGYSRNTSSVSPRGYVPSSTPQQSNY-NTVSTSMNGY 484
           +G+N+FSS LA+ V + +    + GY+R+ SS SPRG+ PS   QQS Y   +   + GY
Sbjct: 424 VGINAFSSPLAIAVGDAT-PGPEPGYARSCSSASPRGFAPSPGSQQSGYGGGLGAGLGGY 482

Query: 485 GSGAMASLGVPGSPGFLNGSSANSPY---------------------------------- 510
           G+  +A LGVPGSP FLNGS+A SP+                                  
Sbjct: 483 GAPGVAGLGVPGSPSFLNGSTATSPFAIMPSSPPLAAASSMSLPAAAPTTSVFSFSPVNM 542

Query: 511 --GMKQKSAFAPVVRPQASPPPSCTSANGNGLQAMS 544
              +KQ+SAFAPV+RP +SPP +C  A+G GL   S
Sbjct: 543 ISAVKQRSAFAPVLRPPSSPPQACPRAHGEGLPDQS 578


>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
          Length = 1499

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 43/169 (25%), Positives = 63/169 (37%), Gaps = 27/169 (15%)

Query: 405  SVPRNHNQIPTLGNN----------------PAHTGMMGVNSFSSQLAVNVSETSQANDQ 448
            S P  HN I T+  +                P  +G    NS  SQ+ +N   ++ A   
Sbjct: 1099 STPLYHNAIKTIATSDDELLPDRPLLPPPPPPQGSGPGISNSQPSQMHLN---SAAAQSP 1155

Query: 449  VGYS----RNTSSVSPRGYVPSSTPQQSNYNTVSTSMNGYGSGAMASLGVPGSPGFLNGS 504
            +G +    +  S   P   +PS TP  SN      +    G    + +  PG P  LN  
Sbjct: 1156 MGMNLPGQQPLSHEPPPAMLPSPTPLGSNIPLHPNAQGTGGPPQNSMMMAPGGPDSLNAP 1215

Query: 505  SANSPYGMKQKSAFAP-VVRPQASPPPSCTSANGNGLQA--MSGLVVPP 550
                P    Q   F P + +P  +  P+     G GLQ    SG+ +PP
Sbjct: 1216 CGPVP-SSSQMMPFPPRLQQPHGAMAPTGGGGGGPGLQQHYPSGMALPP 1263


>gi|5454064 RNA binding motif protein 14 [Homo sapiens]
          Length = 669

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 12/85 (14%)

Query: 430 SFSSQLAVNVSETSQANDQVGYSRNTSSVSPRGYVPSSTPQQSNYNT---VSTSMNGYGS 486
           S+SSQ A  V++ + A     Y+   ++ + +    ++TP   +Y     V T +N YG 
Sbjct: 424 SYSSQPAAYVAQPATA---AAYASQPAAYAAQ----ATTPMAGSYGAQPVVQTQLNSYG- 475

Query: 487 GAMASLGVPGSPGFLNGSSANSPYG 511
            A AS+G+ GS G  + ++A   YG
Sbjct: 476 -AQASMGLSGSYGAQSAAAATGSYG 499


>gi|119829187 alpha 1 type XVII collagen [Homo sapiens]
          Length = 1497

 Score = 35.0 bits (79), Expect = 0.18
 Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 12/118 (10%)

Query: 423  TGMMGVNSFSSQLAVNVSETSQANDQVGYSRNTSSVSPRGYVPSSTPQQS--------NY 474
            T   GV+ FSS ++          D V        + PRG  P   P  S        +Y
Sbjct: 1070 TSGYGVSLFSSSISSEDILAVLQRDDVRQYLRQYLMGPRG--PPGPPGASGDGSLLSLDY 1127

Query: 475  NTVSTSMNGYGSGAMASLGVPGSPG--FLNGSSANSPYGMKQKSAFAPVVRPQASPPP 530
              +S+ +  Y S +  S+G+PG PG   L G+S      + + S F  +V P   P P
Sbjct: 1128 AELSSRILSYMSSSGISIGLPGPPGPPGLPGTSYEELLSLLRGSEFRGIVGPPGPPGP 1185


>gi|190343021 Sec24-related protein D [Homo sapiens]
          Length = 1032

 Score = 34.3 bits (77), Expect = 0.30
 Identities = 40/141 (28%), Positives = 53/141 (37%), Gaps = 17/141 (12%)

Query: 417 GNNPAHTGMMGVNSFSSQLAVNVSETSQANDQVGYSRNTSSVSPRGYVPSSTPQQSNYNT 476
           G N AH        F     VN    + A+    Y  +  S  P G + +S+  Q     
Sbjct: 70  GQNGAHATGHPPQRFPGPPPVN----NVASSHAPYQPSAQSSYP-GPISTSSVTQLGSQL 124

Query: 477 VSTSMNGYGSGAMASLGVPGSPGFLNGSSANSPYGMKQKSAFAPVVRPQASPPPSCTSAN 536
            +  +N YGSG        G PG L+ +S  +P    Q S   P    Q  PPP  T+ N
Sbjct: 125 SAMQINSYGSGMAPPS--QGPPGPLSATSLQTPPRPPQPSILQP--GSQVLPPPP-TTLN 179

Query: 537 GNGLQAM-------SGLVVPP 550
           G G   +        GL  PP
Sbjct: 180 GPGASPLPLPMYRPDGLSGPP 200


>gi|86991432 GLI-Kruppel family member GLI2 [Homo sapiens]
          Length = 1586

 Score = 33.5 bits (75), Expect = 0.52
 Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 6/122 (4%)

Query: 411  NQIP-TLGNNPAHTGMMGVNSFSSQLAVNVSETSQANDQVGYSRNTSSVSPRGYVPSSTP 469
            NQ P +  N PA  G +G +   +++A + +     + ++G   +  +  P  +   S P
Sbjct: 1264 NQFPQSCSNMPAKPGHLG-HPQQTEVAPDPTTMGNRHRELGVPDSALAGVPPPHPVQSYP 1322

Query: 470  QQSNYNTVSTSMNGYGSGAMASLGVPGSPGFLNGSSANSPYGMKQKSAFAPVVRPQASPP 529
            QQS++   S S  GY    + SL     PGF+   +   P G+          RP   P 
Sbjct: 1323 QQSHHLAASMSQEGYHQ--VPSLLPARQPGFMEPQT--GPMGVATAGFGLVQPRPPLEPS 1378

Query: 530  PS 531
            P+
Sbjct: 1379 PT 1380


>gi|83367077 mucin 16 [Homo sapiens]
          Length = 14507

 Score = 33.5 bits (75), Expect = 0.52
 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 8/92 (8%)

Query: 405  SVPRNHNQIPTLGNNPAHTGMMGVNSFSSQLAVNVSETSQANDQVGYSRNTSSVSPRGYV 464
            S+  +   +PTL   P  T     N+ S  L  + S  S +  ++  +   S V P  Y 
Sbjct: 1228 SLEASEGGLPTLSTYPEST-----NTPSIHLGAHASSESPSTIKLTMA---SVVKPGSYT 1279

Query: 465  PSSTPQQSNYNTVSTSMNGYGSGAMASLGVPG 496
            P + P    +  VST+   Y SG+   +  PG
Sbjct: 1280 PLTFPSIETHIHVSTARMAYSSGSSPEMTAPG 1311


>gi|126116589 fibrocystin L [Homo sapiens]
          Length = 4243

 Score = 33.5 bits (75), Expect = 0.52
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 253  TPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTM 290
            TP I A+SP  G T GG  + ++G  F + ++ V  T+
Sbjct: 2090 TPLITAVSPKRGSTAGGTRLTVVGSGFSENMEDVHITI 2127



 Score = 32.7 bits (73), Expect = 0.89
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 2/69 (2%)

Query: 252  ATPCIKAISPSEGWTTGGATVIIIGDNFFDG-LQVVFGTMLVWSELITPHAIRVQTPPRH 310
            ++P + ++SP+ G   GG T++I G+ F+ G   V  G        I P+ +  +T P  
Sbjct: 1829 SSPPVASLSPTSGSIGGGTTLVITGNGFYPGNTTVTIGDEPCQIISINPNEVYCRT-PAG 1887

Query: 311  IPGVVEVTL 319
              G+V+V +
Sbjct: 1888 TTGMVDVKI 1896


>gi|239744758 PREDICTED: hypothetical protein XP_002343261 [Homo
           sapiens]
          Length = 324

 Score = 33.1 bits (74), Expect = 0.68
 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 3/61 (4%)

Query: 483 GYGSGAMASLGVPGSPGFLNG--SSANSPYGMKQKSAFAPVVRPQASPPPSCTSANGNGL 540
           G GS +   +G PG  GF     S A +P G     A+AP  RPQ +P P    A+  G 
Sbjct: 80  GAGSLSATGVGSPGPGGFHGAMESKALAPAGTSGGLAWAPQ-RPQPTPKPHARQAHRGGA 138

Query: 541 Q 541
           Q
Sbjct: 139 Q 139


>gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma)
           [Homo sapiens]
          Length = 526

 Score = 32.7 bits (73), Expect = 0.89
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 14/106 (13%)

Query: 441 ETSQANDQVGYSRNTSSVSPRGYVPSSTPQQSNYNTVSTSMN-GYGSGAMASLGVPGSPG 499
           ++SQ   Q  YS  + S    GY       QS+Y++   S N GYG+ +    G   + G
Sbjct: 28  QSSQPYGQQSYSGYSQSTDTSGY------GQSSYSSYGQSQNTGYGTQSTPQ-GYGSTGG 80

Query: 500 FLNGSSANSPYGMKQKSAFAPVVRPQASPPPSCTSAN-GNGLQAMS 544
           + +  S+ S YG  Q+S++    +    P PS TS + G+  Q+ S
Sbjct: 81  YGSSQSSQSSYG--QQSSYPGYGQ---QPAPSSTSGSYGSSSQSSS 121


>gi|66528642 nuclear receptor subfamily 3, group C, member 1 isoform
           beta [Homo sapiens]
          Length = 742

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 36/136 (26%), Positives = 52/136 (38%), Gaps = 29/136 (21%)

Query: 416 LGNNPAHTGMMGVNSFSSQL-AVNVSETSQANDQV-GYSRNTSSVSPR-------GYVPS 466
           LG         G N   +++ A++V   S +  Q+  Y  NT+S+S +         +P 
Sbjct: 297 LGTVYCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPP 356

Query: 467 STPQQSNYNTVSTSMNGYGSGAMASLGVPGSPG---FLNGSSANSPYGMKQKSAFAPVVR 523
                 N+N       G G   + SLG    PG   F NG S+             P +R
Sbjct: 357 IPVGSENWNRCQ----GSGDDNLTSLGTLNFPGRTVFSNGYSS-------------PSMR 399

Query: 524 PQASPPPSCTSANGNG 539
           P  S PPS +S    G
Sbjct: 400 PDVSSPPSSSSTATTG 415


>gi|66528611 nuclear receptor subfamily 3, group C, member 1 isoform
           alpha [Homo sapiens]
          Length = 777

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 36/136 (26%), Positives = 52/136 (38%), Gaps = 29/136 (21%)

Query: 416 LGNNPAHTGMMGVNSFSSQL-AVNVSETSQANDQV-GYSRNTSSVSPR-------GYVPS 466
           LG         G N   +++ A++V   S +  Q+  Y  NT+S+S +         +P 
Sbjct: 297 LGTVYCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPP 356

Query: 467 STPQQSNYNTVSTSMNGYGSGAMASLGVPGSPG---FLNGSSANSPYGMKQKSAFAPVVR 523
                 N+N       G G   + SLG    PG   F NG S+             P +R
Sbjct: 357 IPVGSENWNRCQ----GSGDDNLTSLGTLNFPGRTVFSNGYSS-------------PSMR 399

Query: 524 PQASPPPSCTSANGNG 539
           P  S PPS +S    G
Sbjct: 400 PDVSSPPSSSSTATTG 415


>gi|66528586 nuclear receptor subfamily 3, group C, member 1 isoform
           alpha [Homo sapiens]
          Length = 777

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 36/136 (26%), Positives = 52/136 (38%), Gaps = 29/136 (21%)

Query: 416 LGNNPAHTGMMGVNSFSSQL-AVNVSETSQANDQV-GYSRNTSSVSPR-------GYVPS 466
           LG         G N   +++ A++V   S +  Q+  Y  NT+S+S +         +P 
Sbjct: 297 LGTVYCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPP 356

Query: 467 STPQQSNYNTVSTSMNGYGSGAMASLGVPGSPG---FLNGSSANSPYGMKQKSAFAPVVR 523
                 N+N       G G   + SLG    PG   F NG S+             P +R
Sbjct: 357 IPVGSENWNRCQ----GSGDDNLTSLGTLNFPGRTVFSNGYSS-------------PSMR 399

Query: 524 PQASPPPSCTSANGNG 539
           P  S PPS +S    G
Sbjct: 400 PDVSSPPSSSSTATTG 415


>gi|66528563 nuclear receptor subfamily 3, group C, member 1 isoform
           alpha [Homo sapiens]
          Length = 777

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 36/136 (26%), Positives = 52/136 (38%), Gaps = 29/136 (21%)

Query: 416 LGNNPAHTGMMGVNSFSSQL-AVNVSETSQANDQV-GYSRNTSSVSPR-------GYVPS 466
           LG         G N   +++ A++V   S +  Q+  Y  NT+S+S +         +P 
Sbjct: 297 LGTVYCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPP 356

Query: 467 STPQQSNYNTVSTSMNGYGSGAMASLGVPGSPG---FLNGSSANSPYGMKQKSAFAPVVR 523
                 N+N       G G   + SLG    PG   F NG S+             P +R
Sbjct: 357 IPVGSENWNRCQ----GSGDDNLTSLGTLNFPGRTVFSNGYSS-------------PSMR 399

Query: 524 PQASPPPSCTSANGNG 539
           P  S PPS +S    G
Sbjct: 400 PDVSSPPSSSSTATTG 415


>gi|66528530 nuclear receptor subfamily 3, group C, member 1 isoform
           alpha [Homo sapiens]
          Length = 777

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 36/136 (26%), Positives = 52/136 (38%), Gaps = 29/136 (21%)

Query: 416 LGNNPAHTGMMGVNSFSSQL-AVNVSETSQANDQV-GYSRNTSSVSPR-------GYVPS 466
           LG         G N   +++ A++V   S +  Q+  Y  NT+S+S +         +P 
Sbjct: 297 LGTVYCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPP 356

Query: 467 STPQQSNYNTVSTSMNGYGSGAMASLGVPGSPG---FLNGSSANSPYGMKQKSAFAPVVR 523
                 N+N       G G   + SLG    PG   F NG S+             P +R
Sbjct: 357 IPVGSENWNRCQ----GSGDDNLTSLGTLNFPGRTVFSNGYSS-------------PSMR 399

Query: 524 PQASPPPSCTSANGNG 539
           P  S PPS +S    G
Sbjct: 400 PDVSSPPSSSSTATTG 415


>gi|4504133 nuclear receptor subfamily 3, group C, member 1 isoform
           alpha [Homo sapiens]
          Length = 777

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 36/136 (26%), Positives = 52/136 (38%), Gaps = 29/136 (21%)

Query: 416 LGNNPAHTGMMGVNSFSSQL-AVNVSETSQANDQV-GYSRNTSSVSPR-------GYVPS 466
           LG         G N   +++ A++V   S +  Q+  Y  NT+S+S +         +P 
Sbjct: 297 LGTVYCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPP 356

Query: 467 STPQQSNYNTVSTSMNGYGSGAMASLGVPGSPG---FLNGSSANSPYGMKQKSAFAPVVR 523
                 N+N       G G   + SLG    PG   F NG S+             P +R
Sbjct: 357 IPVGSENWNRCQ----GSGDDNLTSLGTLNFPGRTVFSNGYSS-------------PSMR 399

Query: 524 PQASPPPSCTSANGNG 539
           P  S PPS +S    G
Sbjct: 400 PDVSSPPSSSSTATTG 415


>gi|66528677 nuclear receptor subfamily 3, group C, member 1 isoform
           gamma [Homo sapiens]
          Length = 778

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 36/136 (26%), Positives = 52/136 (38%), Gaps = 29/136 (21%)

Query: 416 LGNNPAHTGMMGVNSFSSQL-AVNVSETSQANDQV-GYSRNTSSVSPR-------GYVPS 466
           LG         G N   +++ A++V   S +  Q+  Y  NT+S+S +         +P 
Sbjct: 297 LGTVYCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPP 356

Query: 467 STPQQSNYNTVSTSMNGYGSGAMASLGVPGSPG---FLNGSSANSPYGMKQKSAFAPVVR 523
                 N+N       G G   + SLG    PG   F NG S+             P +R
Sbjct: 357 IPVGSENWNRCQ----GSGDDNLTSLGTLNFPGRTVFSNGYSS-------------PSMR 399

Query: 524 PQASPPPSCTSANGNG 539
           P  S PPS +S    G
Sbjct: 400 PDVSSPPSSSSTATTG 415


>gi|21536357 TBP-associated factor 6 isoform delta [Homo sapiens]
          Length = 667

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 26/96 (27%), Positives = 35/96 (36%), Gaps = 6/96 (6%)

Query: 454 NTSSVSPRGYVPSSTPQQSNYNTVSTSMNGYGSGAMASLGVPGSPGFLNGSSANSPYGMK 513
           +T++ +P    PS       Y  VS    G G G   S   P  P       A+SP  + 
Sbjct: 576 STATTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGPTSHPSPVPP------PASSPSPLS 629

Query: 514 QKSAFAPVVRPQASPPPSCTSANGNGLQAMSGLVVP 549
             +          SPPP+  +   NG Q  SG   P
Sbjct: 630 GSALCGGKQEAGDSPPPAPGTPKANGSQPNSGSPQP 665


>gi|21536355 TBP-associated factor 6 isoform gamma [Homo sapiens]
          Length = 667

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 26/96 (27%), Positives = 35/96 (36%), Gaps = 6/96 (6%)

Query: 454 NTSSVSPRGYVPSSTPQQSNYNTVSTSMNGYGSGAMASLGVPGSPGFLNGSSANSPYGMK 513
           +T++ +P    PS       Y  VS    G G G   S   P  P       A+SP  + 
Sbjct: 576 STATTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGPTSHPSPVPP------PASSPSPLS 629

Query: 514 QKSAFAPVVRPQASPPPSCTSANGNGLQAMSGLVVP 549
             +          SPPP+  +   NG Q  SG   P
Sbjct: 630 GSALCGGKQEAGDSPPPAPGTPKANGSQPNSGSPQP 665


>gi|5032147 TBP-associated factor 6 isoform alpha [Homo sapiens]
          Length = 677

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 26/96 (27%), Positives = 35/96 (36%), Gaps = 6/96 (6%)

Query: 454 NTSSVSPRGYVPSSTPQQSNYNTVSTSMNGYGSGAMASLGVPGSPGFLNGSSANSPYGMK 513
           +T++ +P    PS       Y  VS    G G G   S   P  P       A+SP  + 
Sbjct: 586 STATTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGPTSHPSPVPP------PASSPSPLS 639

Query: 514 QKSAFAPVVRPQASPPPSCTSANGNGLQAMSGLVVP 549
             +          SPPP+  +   NG Q  SG   P
Sbjct: 640 GSALCGGKQEAGDSPPPAPGTPKANGSQPNSGSPQP 675


>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
          Length = 1682

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 39/152 (25%), Positives = 53/152 (34%), Gaps = 18/152 (11%)

Query: 400 AEALYSVPRNHNQIPTLGNNPAHTGMMGVNSFSSQLAVNVSETSQANDQVGYSRNTSSVS 459
           A A  + P  H  +P     P      G  S     A     +     +V  SR  SSVS
Sbjct: 317 APAYTAHPPGHRLVPAAPPGPGPRPP-GAESHGCLPATRPPGSDLRESRVQRSRMDSSVS 375

Query: 460 PRG------YVPSSTPQQSNYNTVSTSMNGYGSGAMA---SLGVPGSPGFLNGSSANSPY 510
           P        Y PS  P      T S+S +   +G      + G+PG+  +   +   S +
Sbjct: 376 PAATTACVPYAPSRPPGLPGTTTSSSSSSSSNTGLRGVEPNPGIPGADHYQTPALEVSHH 435

Query: 511 GMKQKSAF--------APVVRPQASPPPSCTS 534
           G    SA         AP   P  S PP  +S
Sbjct: 436 GRLGPSAHSSRKPFLGAPAATPHLSLPPGPSS 467


>gi|21536359 TBP-associated factor 6 isoform alpha [Homo sapiens]
          Length = 677

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 26/96 (27%), Positives = 35/96 (36%), Gaps = 6/96 (6%)

Query: 454 NTSSVSPRGYVPSSTPQQSNYNTVSTSMNGYGSGAMASLGVPGSPGFLNGSSANSPYGMK 513
           +T++ +P    PS       Y  VS    G G G   S   P  P       A+SP  + 
Sbjct: 586 STATTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGPTSHPSPVPP------PASSPSPLS 639

Query: 514 QKSAFAPVVRPQASPPPSCTSANGNGLQAMSGLVVP 549
             +          SPPP+  +   NG Q  SG   P
Sbjct: 640 GSALCGGKQEAGDSPPPAPGTPKANGSQPNSGSPQP 675


>gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Homo
            sapiens]
          Length = 1751

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 486  SGAMASLGVPGSPGFLNGSSANSPYGMKQKSAFAPVVRPQASP-PPSCTSANGNGLQA 542
            +G   SLG  G+PG      A  P G + +S  A    P   P PP      G GL A
Sbjct: 967  TGQKGSLGEAGAPGHKGSKGAPGPAGARGESGLAGAPGPAGPPGPPGPPGPPGPGLPA 1024


>gi|110611233 alpha 1 type XVIII collagen isoform 2 precursor [Homo
           sapiens]
          Length = 1336

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 486 SGAMASLGVPGSPGFLNGSSANSPYGMKQKSAFAPVVRPQASP-PPSCTSANGNGLQA 542
           +G   SLG  G+PG      A  P G + +S  A    P   P PP      G GL A
Sbjct: 552 TGQKGSLGEAGAPGHKGSKGAPGPAGARGESGLAGAPGPAGPPGPPGPPGPPGPGLPA 609


>gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Homo
           sapiens]
          Length = 1516

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 486 SGAMASLGVPGSPGFLNGSSANSPYGMKQKSAFAPVVRPQASP-PPSCTSANGNGLQA 542
           +G   SLG  G+PG      A  P G + +S  A    P   P PP      G GL A
Sbjct: 732 TGQKGSLGEAGAPGHKGSKGAPGPAGARGESGLAGAPGPAGPPGPPGPPGPPGPGLPA 789


>gi|89276766 trophinin isoform 5 [Homo sapiens]
          Length = 1431

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 9/87 (10%)

Query: 424  GMMGVNSFSSQLAVNVSETSQANDQVGYSRNTSSVSPRGYVPSSTPQQSNYNTVSTSMNG 483
            G++  + F   L  N S  S      G+S   S+    G  P+++     ++   +++ G
Sbjct: 1282 GLVTSDGFGGGLGTNASFGSTLGTSAGFSGGLSTSDGFGSRPNAS-----FDRGLSTIIG 1336

Query: 484  YGSGAMASLGVPGSP----GFLNGSSA 506
            +GSG+  S G  G P    GF +G S+
Sbjct: 1337 FGSGSNTSTGFTGEPSTSTGFSSGPSS 1363


>gi|12707580 paired-like homeobox 2b [Homo sapiens]
          Length = 314

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 27/96 (28%), Positives = 35/96 (36%), Gaps = 8/96 (8%)

Query: 452 SRNTSSVSPRGYVPSST--PQQSNYNTVSTSMNGYGSGAMASLGVPGSPGFLNGSSANSP 509
           SR+  S   +   P ST  P  +   T S   NG G G  +  G PG+ G         P
Sbjct: 179 SRDDESKEAKSTDPDSTGGPGPNPNPTPSCGANGGGGGGPSPAGAPGAAG------PGGP 232

Query: 510 YGMKQKSAFAPVVRPQASPPPSCTSANGNGLQAMSG 545
            G   K   A      A+   +  +A   GL A  G
Sbjct: 233 GGEPGKGGAAAAAAAAAAAAAAAAAAAAGGLAAAGG 268


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.133    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,031,069
Number of Sequences: 37866
Number of extensions: 1094540
Number of successful extensions: 3762
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 3641
Number of HSP's gapped (non-prelim): 162
length of query: 551
length of database: 18,247,518
effective HSP length: 107
effective length of query: 444
effective length of database: 14,195,856
effective search space: 6302960064
effective search space used: 6302960064
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.