Search of human proteins with 51889724

Search of human proteins with 51889724

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|51889724 asparagine-linked glycosylation 11 [Homo sapiens]
         (492 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|51889724 asparagine-linked glycosylation 11 [Homo sapiens]        1003   0.0  
gi|14861836 alpha-1,3-mannosyltransferase ALG2 [Homo sapiens]          64   3e-10
gi|50727002 pseudouridylate synthase 7 homolog [Homo sapiens]          30   5.0  

>gi|51889724 asparagine-linked glycosylation 11 [Homo sapiens]
          Length = 492

 Score = 1003 bits (2592), Expect = 0.0
 Identities = 492/492 (100%), Positives = 492/492 (100%)

Query: 1   MAAGERSWCLCKLLRFFYSLFFPGLIVCGTLCVCLVIVLWGIRLLLQRKKKLVSTSRNGK 60
           MAAGERSWCLCKLLRFFYSLFFPGLIVCGTLCVCLVIVLWGIRLLLQRKKKLVSTSRNGK
Sbjct: 1   MAAGERSWCLCKLLRFFYSLFFPGLIVCGTLCVCLVIVLWGIRLLLQRKKKLVSTSRNGK 60

Query: 61  NQMVIAFFHPYCNAGGGGERVLWCALRALQKKYPEAVYVVYTGDVNVNGQQILEGAFRRF 120
           NQMVIAFFHPYCNAGGGGERVLWCALRALQKKYPEAVYVVYTGDVNVNGQQILEGAFRRF
Sbjct: 61  NQMVIAFFHPYCNAGGGGERVLWCALRALQKKYPEAVYVVYTGDVNVNGQQILEGAFRRF 120

Query: 121 NIRLIHPVQFVFLRKRYLVEDSLYPHFTLLGQSLGSIFLGWEALMQCVPDVYIDSMGYAF 180
           NIRLIHPVQFVFLRKRYLVEDSLYPHFTLLGQSLGSIFLGWEALMQCVPDVYIDSMGYAF
Sbjct: 121 NIRLIHPVQFVFLRKRYLVEDSLYPHFTLLGQSLGSIFLGWEALMQCVPDVYIDSMGYAF 180

Query: 181 TLPLFKYIGGCQVGSYVHYPTISTDMLSVVKNQNIGFNNAAFITRNPFLSKVKLIYYYLF 240
           TLPLFKYIGGCQVGSYVHYPTISTDMLSVVKNQNIGFNNAAFITRNPFLSKVKLIYYYLF
Sbjct: 181 TLPLFKYIGGCQVGSYVHYPTISTDMLSVVKNQNIGFNNAAFITRNPFLSKVKLIYYYLF 240

Query: 241 AFIYGLVGSCSDVVMVNSSWTLNHILSLWKVGNCTNIVYPPCDVQTFLDIPLHEKKMTPG 300
           AFIYGLVGSCSDVVMVNSSWTLNHILSLWKVGNCTNIVYPPCDVQTFLDIPLHEKKMTPG
Sbjct: 241 AFIYGLVGSCSDVVMVNSSWTLNHILSLWKVGNCTNIVYPPCDVQTFLDIPLHEKKMTPG 300

Query: 301 HLLVSVGQFRPEKNHPLQIRAFAKLLNKKMVESPPSLKLVLIGGCRNKDDELRVNQLRRL 360
           HLLVSVGQFRPEKNHPLQIRAFAKLLNKKMVESPPSLKLVLIGGCRNKDDELRVNQLRRL
Sbjct: 301 HLLVSVGQFRPEKNHPLQIRAFAKLLNKKMVESPPSLKLVLIGGCRNKDDELRVNQLRRL 360

Query: 361 SEDLGVQEYVEFKINIPFDELKNYLSEATIGLHTMWNEHFGIGVVECMAAGTIILAHNSG 420
           SEDLGVQEYVEFKINIPFDELKNYLSEATIGLHTMWNEHFGIGVVECMAAGTIILAHNSG
Sbjct: 361 SEDLGVQEYVEFKINIPFDELKNYLSEATIGLHTMWNEHFGIGVVECMAAGTIILAHNSG 420

Query: 421 GPKLDIVIPHEGDITGFLAESEEDYAETIAHILSMSAEKRLQIRKSARASVSRFSDQEFE 480
           GPKLDIVIPHEGDITGFLAESEEDYAETIAHILSMSAEKRLQIRKSARASVSRFSDQEFE
Sbjct: 421 GPKLDIVIPHEGDITGFLAESEEDYAETIAHILSMSAEKRLQIRKSARASVSRFSDQEFE 480

Query: 481 VTFLSSVEKLFK 492
           VTFLSSVEKLFK
Sbjct: 481 VTFLSSVEKLFK 492


>gi|14861836 alpha-1,3-mannosyltransferase ALG2 [Homo sapiens]
          Length = 416

 Score = 63.9 bits (154), Expect = 3e-10
 Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 13/270 (4%)

Query: 230 SKVKLIYYYLFAFIYGLVGSCSDVVMVNSSWTLNHILSLWKVGNCTN--IVYPPCDVQTF 287
           S +K +Y     +I       +D ++VNS +T       +K  +  +  ++YP  +V +F
Sbjct: 149 SFLKRLYRAPIDWIEEYTTGMADCILVNSQFTAAVFKETFKSLSHIDPDVLYPSLNVTSF 208

Query: 288 LDI-PLHEKKMTPG---HLLVSVGQFRPEKNHPLQIRAFAKLLNKKMVESPPSLKLVLIG 343
             + P     + P     LL+S+ ++  +KN  L + A  +L  +   +    + L++ G
Sbjct: 209 DSVVPEKLDDLVPKGKKFLLLSINRYERKKNLTLALEALVQLRGRLTSQDWERVHLIVAG 268

Query: 344 GCRNK--DDELRVNQLRRLSEDLGVQEYVEFKINIPFDELKNYLSEATIGLHTMWNEHFG 401
           G   +  ++     +L+++ +   + +YV F  +    +  + L   T  L+T  NEHFG
Sbjct: 269 GYDERVLENVEHYQELKKMVQQSDLGQYVTFLRSFSDKQKISLLHSCTCVLYTPSNEHFG 328

Query: 402 IGVVECMAAGTIILAHNSGGPKLDIVIPHEGDITGFLAESEE-DYAETIAHILSMSAEKR 460
           I  +E M     ++A NSGGP   I    +  +TGFL E +   ++E I   +   + K 
Sbjct: 329 IVPLEAMYMQCPVIAVNSGGPLESI----DHSVTGFLCEPDPVHFSEAIEKFIREPSLKA 384

Query: 461 LQIRKSARASVSRFSDQEFEVTFLSSVEKL 490
                       +FS + F       V KL
Sbjct: 385 TMGLAGRARVKEKFSPEAFTEQLYRYVTKL 414


>gi|50727002 pseudouridylate synthase 7 homolog [Homo sapiens]
          Length = 661

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 16/147 (10%)

Query: 331 VESPPSLKLVLIGGCRNKDDELRVNQLRRLSEDLGVQEYVEFKINIPF-DELKNYLSEAT 389
           V  PP       GG   K+ E ++       ED G+ E  E + +  F D +K+ L+EA 
Sbjct: 58  VPRPPDTVSTGKGG---KNSEAQLEDEEEEEED-GLSEECEEEESESFADMMKHGLTEAD 113

Query: 390 IGLHTMWNEHFGI-GVVECMAAGTIILAHNSGGPKLDIVIPHEGDITGFLAESEEDYAET 448
           +G+    + H G  G+++   +  ++  H  G    D  I H  D++  +   EED +E 
Sbjct: 114 VGITKFVSSHQGFSGILKERYSDFVV--HEIG---KDGRISHLNDLS--IPVDEEDPSED 166

Query: 449 IAHILSMSAEKR---LQIRKSARASVS 472
           I  +L+   ++R   LQ+ K+   SV+
Sbjct: 167 IFTVLTAEEKQRLEELQLFKNKETSVA 193


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.141    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,252,474
Number of Sequences: 37866
Number of extensions: 778466
Number of successful extensions: 2106
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2103
Number of HSP's gapped (non-prelim): 3
length of query: 492
length of database: 18,247,518
effective HSP length: 106
effective length of query: 386
effective length of database: 14,233,722
effective search space: 5494216692
effective search space used: 5494216692
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.