Search of human proteins with 133922590

Search of human proteins with 133922590

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|133922590 alcohol dehydrogenase, iron containing, 1 [Homo
sapiens]
         (467 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|133922590 alcohol dehydrogenase, iron containing, 1 [Homo sap...   936   0.0  
gi|18379328 WW domain-containing adapter with a coiled-coil regi...    30   4.7  
gi|18379332 WW domain-containing adapter with a coiled-coil regi...    30   4.7  
gi|242247193 SH2B adaptor protein 2 [Homo sapiens]                     30   6.1  
gi|239755454 PREDICTED: hypothetical protein [Homo sapiens]            30   6.1  
gi|239744258 PREDICTED: hypothetical protein LOC100128703 [Homo ...    30   6.1  

>gi|133922590 alcohol dehydrogenase, iron containing, 1 [Homo
           sapiens]
          Length = 467

 Score =  936 bits (2418), Expect = 0.0
 Identities = 467/467 (100%), Positives = 467/467 (100%)

Query: 1   MAAAARARVAYLLRQLQRAACQCPTHSHTYSQAPGLSPSGKTTDYAFEMAVSNIRYGAAV 60
           MAAAARARVAYLLRQLQRAACQCPTHSHTYSQAPGLSPSGKTTDYAFEMAVSNIRYGAAV
Sbjct: 1   MAAAARARVAYLLRQLQRAACQCPTHSHTYSQAPGLSPSGKTTDYAFEMAVSNIRYGAAV 60

Query: 61  TKEVGMDLKNMGAKNVCLMTDKNLSKLPPVQVAMDSLVKNGIPFTVYDNVRVEPTDSSFM 120
           TKEVGMDLKNMGAKNVCLMTDKNLSKLPPVQVAMDSLVKNGIPFTVYDNVRVEPTDSSFM
Sbjct: 61  TKEVGMDLKNMGAKNVCLMTDKNLSKLPPVQVAMDSLVKNGIPFTVYDNVRVEPTDSSFM 120

Query: 121 EAIEFAQKGAFDAYVAVGGGSTMDTCKAANLYASSPHSDFLDYVSAPIGKGKPVSVPLKP 180
           EAIEFAQKGAFDAYVAVGGGSTMDTCKAANLYASSPHSDFLDYVSAPIGKGKPVSVPLKP
Sbjct: 121 EAIEFAQKGAFDAYVAVGGGSTMDTCKAANLYASSPHSDFLDYVSAPIGKGKPVSVPLKP 180

Query: 181 LIAVPTTSGTGSETTGVAIFDYEHLKVKIGITSRAIKPTLGLIDPLHTLHMPARVVANSG 240
           LIAVPTTSGTGSETTGVAIFDYEHLKVKIGITSRAIKPTLGLIDPLHTLHMPARVVANSG
Sbjct: 181 LIAVPTTSGTGSETTGVAIFDYEHLKVKIGITSRAIKPTLGLIDPLHTLHMPARVVANSG 240

Query: 241 FDVLCHALESYTTLPYHLRSPCPSNPITRPAYQGSNPISDIWAIHALRIVAKYLKRAVRN 300
           FDVLCHALESYTTLPYHLRSPCPSNPITRPAYQGSNPISDIWAIHALRIVAKYLKRAVRN
Sbjct: 241 FDVLCHALESYTTLPYHLRSPCPSNPITRPAYQGSNPISDIWAIHALRIVAKYLKRAVRN 300

Query: 301 PDDLEARSHMHLASAFAGIGFGNAGVHLCHGMSYPISGLVKMYKAKDYNVDHPLVPHGLS 360
           PDDLEARSHMHLASAFAGIGFGNAGVHLCHGMSYPISGLVKMYKAKDYNVDHPLVPHGLS
Sbjct: 301 PDDLEARSHMHLASAFAGIGFGNAGVHLCHGMSYPISGLVKMYKAKDYNVDHPLVPHGLS 360

Query: 361 VVLTSPAVFTFTAQMFPERHLEMAEILGADTRTARIQDAGLVLADTLRKFLFDLDVDDGL 420
           VVLTSPAVFTFTAQMFPERHLEMAEILGADTRTARIQDAGLVLADTLRKFLFDLDVDDGL
Sbjct: 361 VVLTSPAVFTFTAQMFPERHLEMAEILGADTRTARIQDAGLVLADTLRKFLFDLDVDDGL 420

Query: 421 AAVGYSKADIPALVKGTLPQERVTKLAPCPQSEEDLAALFEASMKLY 467
           AAVGYSKADIPALVKGTLPQERVTKLAPCPQSEEDLAALFEASMKLY
Sbjct: 421 AAVGYSKADIPALVKGTLPQERVTKLAPCPQSEEDLAALFEASMKLY 467


>gi|18379328 WW domain-containing adapter with a coiled-coil region
           isoform 1 [Homo sapiens]
          Length = 647

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%)

Query: 153 ASSPHSDFLDYVSAPIGKGKPVSVPLKPLIAVPTTSGTGSETTGV 197
           ASSP S    YVS  I   +  +VP+KPLI+ P  S     +T V
Sbjct: 444 ASSPRS----YVSPRISTPQTNTVPIKPLISTPPVSSQPKVSTPV 484


>gi|18379332 WW domain-containing adapter with a coiled-coil region
           isoform 3 [Homo sapiens]
          Length = 544

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%)

Query: 153 ASSPHSDFLDYVSAPIGKGKPVSVPLKPLIAVPTTSGTGSETTGV 197
           ASSP S    YVS  I   +  +VP+KPLI+ P  S     +T V
Sbjct: 341 ASSPRS----YVSPRISTPQTNTVPIKPLISTPPVSSQPKVSTPV 381


>gi|242247193 SH2B adaptor protein 2 [Homo sapiens]
          Length = 675

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 6/84 (7%)

Query: 110 VRVEPTDSSFMEAIEFAQKGAF------DAYVAVGGGSTMDTCKAANLYASSPHSDFLDY 163
           +R+  T ++ +E ++  ++GA       DA    GG +    C+     A +     L++
Sbjct: 222 LRLSRTLAAKVELVDIQREGALRFMVADDAAAGSGGSAQWQKCRLLLRRAVAEERFRLEF 281

Query: 164 VSAPIGKGKPVSVPLKPLIAVPTT 187
              P      VS+PL  +I V TT
Sbjct: 282 FVPPKASRPKVSIPLSAIIEVRTT 305


>gi|239755454 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 305

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 6/76 (7%)

Query: 126 AQKGAFDAYVAVGGGSTMDTCKAANLYASSPHSDFLDYV----SAPIGKGKPVSVPL-KP 180
           A  GA     + GG S  D C    +Y + P  D +  V    ++     KP SVP  +P
Sbjct: 20  ASAGALTIVSSHGGDSDKDLCARTQIYGAQPREDQMGSVEKLTTSAFLSAKPGSVPAPRP 79

Query: 181 LIAVPTTSGTGSETTG 196
           L ++   +G  SE  G
Sbjct: 80  LRSIDGEAG-HSEAAG 94


>gi|239744258 PREDICTED: hypothetical protein LOC100128703 [Homo
           sapiens]
          Length = 389

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 6/76 (7%)

Query: 126 AQKGAFDAYVAVGGGSTMDTCKAANLYASSPHSDFLDYV----SAPIGKGKPVSVPL-KP 180
           A  GA     + GG S  D C    +Y + P  D +  V    ++     KP SVP  +P
Sbjct: 20  ASAGALTIVSSHGGDSDKDLCARTQIYGAQPREDQMGSVEKLTTSAFLSAKPGSVPAPRP 79

Query: 181 LIAVPTTSGTGSETTG 196
           L ++   +G  SE  G
Sbjct: 80  LRSIDGEAG-HSEAAG 94


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.134    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,444,414
Number of Sequences: 37866
Number of extensions: 796348
Number of successful extensions: 1978
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1977
Number of HSP's gapped (non-prelim): 6
length of query: 467
length of database: 18,247,518
effective HSP length: 106
effective length of query: 361
effective length of database: 14,233,722
effective search space: 5138373642
effective search space used: 5138373642
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.