Search of human proteins with 47458825

Search of human proteins with 47458825

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|47458825 hypothetical protein LOC144577 [Homo sapiens]
         (445 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|47458825 hypothetical protein LOC144577 [Homo sapiens]             892   0.0  
gi|168229252 asparagine synthetase [Homo sapiens]                      31   2.6  
gi|168229250 asparagine synthetase [Homo sapiens]                      31   2.6  
gi|168229248 asparagine synthetase [Homo sapiens]                      31   2.6  
gi|190194365 PAP associated domain containing 1 [Homo sapiens]         30   3.4  
gi|56676335 RAP1 interacting factor 1 [Homo sapiens]                   30   5.8  
gi|5803187 transaldolase 1 [Homo sapiens]                              29   7.5  

>gi|47458825 hypothetical protein LOC144577 [Homo sapiens]
          Length = 445

 Score =  892 bits (2306), Expect = 0.0
 Identities = 445/445 (100%), Positives = 445/445 (100%)

Query: 1   MGESIPLAAPVPVEQAVLETFFSHLGIFSYDKAKDNVEKEREANKSAGGSWLSLLAALAH 60
           MGESIPLAAPVPVEQAVLETFFSHLGIFSYDKAKDNVEKEREANKSAGGSWLSLLAALAH
Sbjct: 1   MGESIPLAAPVPVEQAVLETFFSHLGIFSYDKAKDNVEKEREANKSAGGSWLSLLAALAH 60

Query: 61  LAAAEKVYHSLTYLGQKLGGQSFFSRKDSIRTIYTSLHNELKKVVTGRGALGGTAPHVEE 120
           LAAAEKVYHSLTYLGQKLGGQSFFSRKDSIRTIYTSLHNELKKVVTGRGALGGTAPHVEE
Sbjct: 61  LAAAEKVYHSLTYLGQKLGGQSFFSRKDSIRTIYTSLHNELKKVVTGRGALGGTAPHVEE 120

Query: 121 LLSHLSEQLCFFVQARMEIADFYEKMYTLSTQKFINAEELVGLLDAIMKKYSSRFHHPIL 180
           LLSHLSEQLCFFVQARMEIADFYEKMYTLSTQKFINAEELVGLLDAIMKKYSSRFHHPIL
Sbjct: 121 LLSHLSEQLCFFVQARMEIADFYEKMYTLSTQKFINAEELVGLLDAIMKKYSSRFHHPIL 180

Query: 181 SPLESSFQLEVDVLCHLLKAQAQVSEWKFLPSLVNLHSAHTKLQTWGQIFEKQRETKKHL 240
           SPLESSFQLEVDVLCHLLKAQAQVSEWKFLPSLVNLHSAHTKLQTWGQIFEKQRETKKHL
Sbjct: 181 SPLESSFQLEVDVLCHLLKAQAQVSEWKFLPSLVNLHSAHTKLQTWGQIFEKQRETKKHL 240

Query: 241 FGGQSQKAVQPPHLFLWLMKLKNMLLAKFSFYFHEALSRQTTASEMKTLTAKANPDFFGK 300
           FGGQSQKAVQPPHLFLWLMKLKNMLLAKFSFYFHEALSRQTTASEMKTLTAKANPDFFGK
Sbjct: 241 FGGQSQKAVQPPHLFLWLMKLKNMLLAKFSFYFHEALSRQTTASEMKTLTAKANPDFFGK 300

Query: 301 ISSFIRKYDAANVSLIFDNRGSESFQGHGYHHPHSYREAPKGVDQYPAVVSLPSDRPVMH 360
           ISSFIRKYDAANVSLIFDNRGSESFQGHGYHHPHSYREAPKGVDQYPAVVSLPSDRPVMH
Sbjct: 301 ISSFIRKYDAANVSLIFDNRGSESFQGHGYHHPHSYREAPKGVDQYPAVVSLPSDRPVMH 360

Query: 361 WPNVIMIMTDRTSDLNSLEKVVHFYDDKVQSTYFLTRPEPHFTIVIIFESKKSERDSHFI 420
           WPNVIMIMTDRTSDLNSLEKVVHFYDDKVQSTYFLTRPEPHFTIVIIFESKKSERDSHFI
Sbjct: 361 WPNVIMIMTDRTSDLNSLEKVVHFYDDKVQSTYFLTRPEPHFTIVIIFESKKSERDSHFI 420

Query: 421 SFLNEVSLALKNPKVFASLKPGSKG 445
           SFLNEVSLALKNPKVFASLKPGSKG
Sbjct: 421 SFLNEVSLALKNPKVFASLKPGSKG 445


>gi|168229252 asparagine synthetase [Homo sapiens]
          Length = 561

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 13/100 (13%)

Query: 301 ISSFIRKYDAANVSLIFDNRGSESF-QGHGYHHPHSYREAPKGVDQYPAVVSLPSDRPVM 359
           IS +IRK   + V  IF   GS+   QG+ Y H     +AP      P      S+R + 
Sbjct: 348 ISKYIRKNTDSVV--IFSGEGSDELTQGYIYFH-----KAPS-----PEKAEEESERLLR 395

Query: 360 HWPNVIMIMTDRTSDLNSLEKVVHFYDDKVQSTYFLTRPE 399
                 ++  DRT+  + LE  V F D +  S Y    PE
Sbjct: 396 ELYLFDVLRADRTTAAHGLELRVPFLDHRFSSYYLSLPPE 435


>gi|168229250 asparagine synthetase [Homo sapiens]
          Length = 561

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 13/100 (13%)

Query: 301 ISSFIRKYDAANVSLIFDNRGSESF-QGHGYHHPHSYREAPKGVDQYPAVVSLPSDRPVM 359
           IS +IRK   + V  IF   GS+   QG+ Y H     +AP      P      S+R + 
Sbjct: 348 ISKYIRKNTDSVV--IFSGEGSDELTQGYIYFH-----KAPS-----PEKAEEESERLLR 395

Query: 360 HWPNVIMIMTDRTSDLNSLEKVVHFYDDKVQSTYFLTRPE 399
                 ++  DRT+  + LE  V F D +  S Y    PE
Sbjct: 396 ELYLFDVLRADRTTAAHGLELRVPFLDHRFSSYYLSLPPE 435


>gi|168229248 asparagine synthetase [Homo sapiens]
          Length = 561

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 13/100 (13%)

Query: 301 ISSFIRKYDAANVSLIFDNRGSESF-QGHGYHHPHSYREAPKGVDQYPAVVSLPSDRPVM 359
           IS +IRK   + V  IF   GS+   QG+ Y H     +AP      P      S+R + 
Sbjct: 348 ISKYIRKNTDSVV--IFSGEGSDELTQGYIYFH-----KAPS-----PEKAEEESERLLR 395

Query: 360 HWPNVIMIMTDRTSDLNSLEKVVHFYDDKVQSTYFLTRPE 399
                 ++  DRT+  + LE  V F D +  S Y    PE
Sbjct: 396 ELYLFDVLRADRTTAAHGLELRVPFLDHRFSSYYLSLPPE 435


>gi|190194365 PAP associated domain containing 1 [Homo sapiens]
          Length = 582

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 12/31 (38%), Positives = 20/31 (64%)

Query: 15  QAVLETFFSHLGIFSYDKAKDNVEKEREANK 45
           + +L+ FF + G F++DK   N+ + RE NK
Sbjct: 438 ELLLKEFFEYFGNFAFDKNSINIRQGREQNK 468


>gi|56676335 RAP1 interacting factor 1 [Homo sapiens]
          Length = 2472

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 9/95 (9%)

Query: 85  SRKDSIRTIYTSLHNELKKV---VTGRGALGGTAPHVEELLSHLSEQLCFFV-----QAR 136
           S+ D +  +Y+ L+N+L+K+   +        T  +  ELL  LS  LC        Q R
Sbjct: 869 SKLDEVPKVYSCLNNKLEKLLGEIIACLQFSYTGTYDSELLEQLSPLLCIIFLHKNKQIR 928

Query: 137 MEIADFYEKMYTLSTQKFINAEELVGLLDAIMKKY 171
            + A F+   +       +  EEL  +L    +K+
Sbjct: 929 KQSAQFWNATFA-KVMMLVYPEELKPVLTQAKQKF 962


>gi|5803187 transaldolase 1 [Homo sapiens]
          Length = 337

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 16/56 (28%), Positives = 28/56 (50%)

Query: 53  SLLAALAHLAAAEKVYHSLTYLGQKLGGQSFFSRKDSIRTIYTSLHNELKKVVTGR 108
           SL+ A A + A +++       G+KLGG      K++I  ++     E+ K + GR
Sbjct: 47  SLILAAAQMPAYQELVEEAIAYGRKLGGSQEDQIKNAIDKLFVLFGAEILKKIPGR 102


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.133    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,022,991
Number of Sequences: 37866
Number of extensions: 653844
Number of successful extensions: 1506
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1503
Number of HSP's gapped (non-prelim): 7
length of query: 445
length of database: 18,247,518
effective HSP length: 105
effective length of query: 340
effective length of database: 14,271,588
effective search space: 4852339920
effective search space used: 4852339920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.