BLASTP matches in selected species for HERV-FRD - GI:46485773

The following table provides the supporting data for the comparative genomics plot for this protein. Select the protein identifier to see the matching RefSeq entry at NCBI. Searches at NCBI may reflect newer proteins sets or multiple strains of that species.

Species          Protein        Score Size(aa) Description

Self-match       46485773        1105    538   syncytin 2
M. musculus      27734142         280    618   envelope glycoprotein syncytin-B 
D. rerio         189545828         51    630   PREDICTED: hypothetical protein 
C. intestinalis  198416484         30   1079   PREDICTED: similar to GH16383 
S. purpuratus    115968650         30   2472   PREDICTED: similar to brain RPTPmam4 ...
D. melanogaster  24653714          32    282   Boundary element-associated factor of...
C. elegans       25149347          37   1022   hypothetical protein C18C4.5 
A. thaliana      145336252         32    169   AGL64; peptidase 
S. cerevisiae    6322331           29   2214   Bifunctional carbamoylphosphate synth...
E. coli          89108216          33    342   predicted tail protein 
A. pernix        118431279         33    490   sodium/solute symporter 

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Search results were obtained with NCBI BLAST and RefSeq entries.

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