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Search of human proteins with 44921608
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|44921608 Morf4 family associated protein 1-like 1 [Homo
sapiens]
(127 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|44921608 Morf4 family associated protein 1-like 1 [Homo sapiens] 249 3e-67
gi|15193294 Mof4 family associated protein 1 [Homo sapiens] 209 5e-55
gi|56550047 uveal autoantigen with coiled-coil domains and ankyr... 42 1e-04
gi|59850762 uveal autoantigen with coiled-coil domains and ankyr... 42 1e-04
gi|31377634 guanylate binding protein 4 [Homo sapiens] 33 0.045
gi|82880656 coiled-coil domain containing 46 isoform a [Homo sap... 33 0.059
gi|126723390 ankyrin repeat domain 24 [Homo sapiens] 33 0.059
gi|197276647 leucine rich repeat (in FLII) interacting protein 2... 33 0.077
gi|5453726 leucine rich repeat (in FLII) interacting protein 2 i... 33 0.077
gi|8923224 leucine rich repeat (in FLII) interacting protein 2 i... 33 0.077
gi|166295204 hypothetical protein LOC80127 [Homo sapiens] 32 0.10
gi|167614504 laminin, beta 1 precursor [Homo sapiens] 32 0.13
gi|32698688 citron [Homo sapiens] 32 0.13
gi|132566536 voltage-gated calcium channel alpha(2)delta-4 subun... 32 0.17
gi|31982906 cingulin-like 1 [Homo sapiens] 31 0.22
gi|4504919 keratin 8 [Homo sapiens] 31 0.29
gi|157694505 LINE-1 type transposase domain containing 1 [Homo s... 31 0.29
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ... 30 0.38
gi|122937382 Fas (TNFRSF6) binding factor 1 [Homo sapiens] 30 0.50
gi|4885583 Rho-associated, coiled-coil containing protein kinase... 30 0.65
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 30 0.65
gi|189217904 RPGRIP1-like isoform b [Homo sapiens] 30 0.65
gi|118442834 RPGRIP1-like isoform a [Homo sapiens] 30 0.65
gi|23943912 phosphoinositide-3-kinase, regulatory subunit 4 [Hom... 29 0.85
gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens] 29 0.85
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens] 29 0.85
gi|122937398 dynein, cytoplasmic 2, heavy chain 1 [Homo sapiens] 29 1.1
gi|109255249 keratin 4 [Homo sapiens] 29 1.1
gi|198442834 coiled-coil domain containing 152 [Homo sapiens] 29 1.1
gi|157502225 Janus kinase and microtubule interacting protein 3 ... 28 1.5
>gi|44921608 Morf4 family associated protein 1-like 1 [Homo sapiens]
Length = 127
Score = 249 bits (637), Expect = 3e-67
Identities = 127/127 (100%), Positives = 127/127 (100%)
Query: 1 MRPLDIDEVEAPEEVEVLEPEEDFEQFLLPVINEMREDIASLIREHGRAYLRTRSKLWEM 60
MRPLDIDEVEAPEEVEVLEPEEDFEQFLLPVINEMREDIASLIREHGRAYLRTRSKLWEM
Sbjct: 1 MRPLDIDEVEAPEEVEVLEPEEDFEQFLLPVINEMREDIASLIREHGRAYLRTRSKLWEM 60
Query: 61 DNMLIQIKTQVEASEESALNHVQHPSGEADERVSELCEKAEEKAKEIAKMAEMLVELVWR 120
DNMLIQIKTQVEASEESALNHVQHPSGEADERVSELCEKAEEKAKEIAKMAEMLVELVWR
Sbjct: 61 DNMLIQIKTQVEASEESALNHVQHPSGEADERVSELCEKAEEKAKEIAKMAEMLVELVWR 120
Query: 121 IERSESS 127
IERSESS
Sbjct: 121 IERSESS 127
>gi|15193294 Mof4 family associated protein 1 [Homo sapiens]
Length = 127
Score = 209 bits (532), Expect = 5e-55
Identities = 108/127 (85%), Positives = 115/127 (90%)
Query: 1 MRPLDIDEVEAPEEVEVLEPEEDFEQFLLPVINEMREDIASLIREHGRAYLRTRSKLWEM 60
MRPLDI E+ PEEVEVLEPEEDFEQFLLPVINEMREDIASL REHGRAYLR RSKLWEM
Sbjct: 1 MRPLDIVELAEPEEVEVLEPEEDFEQFLLPVINEMREDIASLTREHGRAYLRNRSKLWEM 60
Query: 61 DNMLIQIKTQVEASEESALNHVQHPSGEADERVSELCEKAEEKAKEIAKMAEMLVELVWR 120
DNMLIQIKTQVEASEESALNH+Q+P A+ R ++ CEKAEEKAKEIAKMAEMLVELV R
Sbjct: 61 DNMLIQIKTQVEASEESALNHLQNPGDAAEGRAAKRCEKAEEKAKEIAKMAEMLVELVRR 120
Query: 121 IERSESS 127
IE+SESS
Sbjct: 121 IEKSESS 127
>gi|56550047 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 2 [Homo sapiens]
Length = 1403
Score = 42.0 bits (97), Expect = 1e-04
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 20 PEEDFEQFLLPVINEMREDIASLI---REHGRAYLRTRSKLWEMDNMLIQIKTQVEASE- 75
P E FE + NE+ E L+ REH ++ R E++N+ ++ V+ E
Sbjct: 615 PAEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHVKPEEH 674
Query: 76 ESALNHVQHPSGEADERVSELCEKAEEKAKEIAKM 110
E + ++ SGE ++++EL K + KEI K+
Sbjct: 675 EQVKSRLEQKSGELGKKITELTLKNQTLQKEIEKV 709
Score = 26.2 bits (56), Expect = 7.2
Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 19/101 (18%)
Query: 32 INEMREDIASLIREHGRAYLRTRSKLWEMDNMLIQIKTQVEASEESALNHVQHPSGEADE 91
I+ + E +A+L R++ + +L K ++ A +E L H D+
Sbjct: 1227 ISSLNEKLANLNRKYEEV----------CEEVLHAKKKEISAKDEKELLHFSIEQEIKDQ 1276
Query: 92 R---------VSELCEKAEEKAKEIAKMAEMLVELVWRIER 123
+ ++EL + +E AK+I + EL+ +ER
Sbjct: 1277 KERCDKSLTTITELQRRIQESAKQIEAKDNKITELLNDVER 1317
>gi|59850762 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 1 [Homo sapiens]
Length = 1416
Score = 42.0 bits (97), Expect = 1e-04
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 20 PEEDFEQFLLPVINEMREDIASLI---REHGRAYLRTRSKLWEMDNMLIQIKTQVEASE- 75
P E FE + NE+ E L+ REH ++ R E++N+ ++ V+ E
Sbjct: 628 PAEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHVKPEEH 687
Query: 76 ESALNHVQHPSGEADERVSELCEKAEEKAKEIAKM 110
E + ++ SGE ++++EL K + KEI K+
Sbjct: 688 EQVKSRLEQKSGELGKKITELTLKNQTLQKEIEKV 722
Score = 26.2 bits (56), Expect = 7.2
Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 19/101 (18%)
Query: 32 INEMREDIASLIREHGRAYLRTRSKLWEMDNMLIQIKTQVEASEESALNHVQHPSGEADE 91
I+ + E +A+L R++ + +L K ++ A +E L H D+
Sbjct: 1240 ISSLNEKLANLNRKYEEV----------CEEVLHAKKKEISAKDEKELLHFSIEQEIKDQ 1289
Query: 92 R---------VSELCEKAEEKAKEIAKMAEMLVELVWRIER 123
+ ++EL + +E AK+I + EL+ +ER
Sbjct: 1290 KERCDKSLTTITELQRRIQESAKQIEAKDNKITELLNDVER 1330
>gi|31377634 guanylate binding protein 4 [Homo sapiens]
Length = 640
Score = 33.5 bits (75), Expect = 0.045
Identities = 21/103 (20%), Positives = 50/103 (48%), Gaps = 18/103 (17%)
Query: 13 EEVEVLEPEE-DFEQFLLPVINEMREDIASLIREHGRAYLRTRSKLWEMDNMLIQIKTQV 71
E+ +++E +E F++++ + ++ E+ +L+REH R +K ++
Sbjct: 526 EQQQMMEAQERSFQEYMAQMEKKLEEERENLLREHERL-----------------LKHKL 568
Query: 72 EASEESALNHVQHPSGEADERVSELCEKAEEKAKEIAKMAEML 114
+ EE Q S + ++ +++L EK E E ++ ++L
Sbjct: 569 KVQEEMLKEEFQKKSEQLNKEINQLKEKIESTKNEQLRLLKIL 611
>gi|82880656 coiled-coil domain containing 46 isoform a [Homo
sapiens]
Length = 955
Score = 33.1 bits (74), Expect = 0.059
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 15/109 (13%)
Query: 23 DFEQFLLPVINEMREDIASLIREHGRAYLRTRSKLWEMDNMLIQIKTQVEASE------- 75
D+EQ + + + DI L +EH + + S + E++ + Q+K Q++ SE
Sbjct: 472 DYEQNMKLLQTKYDADINLLKQEHALSASKASSMIEELEQNVCQLKQQLQESELQRKQQL 531
Query: 76 -------ESALNHVQH-PSGEADERVSELCEKAEEKAKEIAKMAEMLVE 116
+ +H++H +A + SEL + E+ K+I K E L E
Sbjct: 532 RDQENKFQMEKSHLKHIYEKKAHDLQSELDKGKEDTQKKIHKFEEALKE 580
>gi|126723390 ankyrin repeat domain 24 [Homo sapiens]
Length = 1146
Score = 33.1 bits (74), Expect = 0.059
Identities = 21/99 (21%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 31 VINEMREDIASL---IREHGRAYLRTRSKLWEMDNMLIQIKTQVEASEESALNHVQHPSG 87
++ ++ ++A L + E GR + +T ++++++ + +K++ A+E Q G
Sbjct: 970 IVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRG 1029
Query: 88 ---------EADERVSELCEKAEEKAKEIAKMAEMLVEL 117
+A R E +KA+EK K+I ++++ + L
Sbjct: 1030 LRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNL 1068
>gi|197276647 leucine rich repeat (in FLII) interacting protein 2
isoform 3 [Homo sapiens]
Length = 424
Score = 32.7 bits (73), Expect = 0.077
Identities = 21/101 (20%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 22 EDFEQFLLPVINEMREDIASLIREHGRAYLRTRSKLWEMDNMLIQIKTQVEASEESALNH 81
+D E + + E++E ++ + ++ +A + E +N++ Q+ T + EE
Sbjct: 123 QDVEGRYMQGLKELKESLSEVEEKYKKAMVSNAQLDNEKNNLIYQVDTLKDVIEEQ---- 178
Query: 82 VQHPSGEADERVSELCEKAEEKAKEIAKMAEMLVELVWRIE 122
+E+++E + EEK+KE+ + M L ++E
Sbjct: 179 --------EEQMAEFYRENEEKSKELERQKHMCSVLQHKME 211
>gi|5453726 leucine rich repeat (in FLII) interacting protein 2
isoform 1 [Homo sapiens]
Length = 721
Score = 32.7 bits (73), Expect = 0.077
Identities = 21/101 (20%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 22 EDFEQFLLPVINEMREDIASLIREHGRAYLRTRSKLWEMDNMLIQIKTQVEASEESALNH 81
+D E + + E++E ++ + ++ +A + E +N++ Q+ T + EE
Sbjct: 355 QDVEGRYMQGLKELKESLSEVEEKYKKAMVSNAQLDNEKNNLIYQVDTLKDVIEEQ---- 410
Query: 82 VQHPSGEADERVSELCEKAEEKAKEIAKMAEMLVELVWRIE 122
+E+++E + EEK+KE+ + M L ++E
Sbjct: 411 --------EEQMAEFYRENEEKSKELERQKHMCSVLQHKME 443
>gi|8923224 leucine rich repeat (in FLII) interacting protein 2
isoform 2 [Homo sapiens]
Length = 400
Score = 32.7 bits (73), Expect = 0.077
Identities = 20/91 (21%), Positives = 45/91 (49%), Gaps = 12/91 (13%)
Query: 32 INEMREDIASLIREHGRAYLRTRSKLWEMDNMLIQIKTQVEASEESALNHVQHPSGEADE 91
++E+RE ++ + ++ +A + E +N++ Q+ T + EE +E
Sbjct: 109 LSELRESLSEVEEKYKKAMVSNAQLDNEKNNLIYQVDTLKDVIEEQ------------EE 156
Query: 92 RVSELCEKAEEKAKEIAKMAEMLVELVWRIE 122
+++E + EEK+KE+ + M L ++E
Sbjct: 157 QMAEFYRENEEKSKELERQKHMCSVLQHKME 187
>gi|166295204 hypothetical protein LOC80127 [Homo sapiens]
Length = 529
Score = 32.3 bits (72), Expect = 0.10
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 34 EMREDIASLIREHGRAYLRTRSKLWEMDNMLIQIKTQVEASEESALNHVQHPSGEADERV 93
+M +DI S++ +YL+ + + E DNM+ ++K Q+ ++E A + ++
Sbjct: 73 KMEKDIMSVL-----SYLKKQDQ--EKDNMIEKLKQQLNETKEKAQEEKDKLEQKYTRQI 125
Query: 94 SELCEKAEEKAKEI 107
+EL + +KAKEI
Sbjct: 126 NELEGQFHQKAKEI 139
>gi|167614504 laminin, beta 1 precursor [Homo sapiens]
Length = 1786
Score = 32.0 bits (71), Expect = 0.13
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 62 NMLIQIKTQVEASEESALNHVQHPSGEADERVSELCEKAEEKAKEIAKMAEMLVELVWRI 121
N+L I+++ ASEE+ N Q S E + V EL KA + + E AE + ++V+ +
Sbjct: 1625 NLLTSIESETAASEETLFNASQRIS-ELERNVEELKRKAAQNSGE----AEYIEKVVYTV 1679
Query: 122 ERS 124
++S
Sbjct: 1680 KQS 1682
>gi|32698688 citron [Homo sapiens]
Length = 2027
Score = 32.0 bits (71), Expect = 0.13
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 16/125 (12%)
Query: 13 EEVEVLEPEEDFEQFLLPVINEMREDIASL----------IREHGRAYLRTRSKLWEMDN 62
+E++ E + E+ L ++N++ ED+ S +RE A + K E +
Sbjct: 550 QEIKEQEYQAQVEEMRL-MMNQLEEDLVSARRRSDLYESELRESRLAAEEFKRKATECQH 608
Query: 63 MLIQIKTQ--VEASEESALNHVQHPSGEADERVSELCEKAEEKAKEIAKMAEMLVELVWR 120
L++ K Q E E + L + + E ++ EL EK E+ K + E+L +
Sbjct: 609 KLLKAKDQGKPEVGEYAKLEKI---NAEQQLKIQELQEKLEKAVKASTEATELLQNIRQA 665
Query: 121 IERSE 125
ER+E
Sbjct: 666 KERAE 670
>gi|132566536 voltage-gated calcium channel alpha(2)delta-4 subunit
[Homo sapiens]
Length = 1137
Score = 31.6 bits (70), Expect = 0.17
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 59 EMDNMLIQ----IKTQVEASEESALNHVQHPSGEADERVSELCEKAEEKAKEIAKMAEML 114
+M+NML + ++ VEA+EE+ LNH + S D S L + +EK + AE L
Sbjct: 129 DMENMLRRKVEAVQNLVEAAEEADLNHEFNESLVFDYYNSVLINERDEKGNFVELGAEFL 188
Query: 115 VE 116
+E
Sbjct: 189 LE 190
>gi|31982906 cingulin-like 1 [Homo sapiens]
Length = 1302
Score = 31.2 bits (69), Expect = 0.22
Identities = 26/118 (22%), Positives = 50/118 (42%)
Query: 7 DEVEAPEEVEVLEPEEDFEQFLLPVINEMREDIASLIREHGRAYLRTRSKLWEMDNMLIQ 66
+E EA LE E + Q L + ++ ++ ++E + R EM+N
Sbjct: 886 EEKEAVSARRALENELEAAQGNLSQTTQEQKQLSEKLKEESEQKEQLRRLKNEMENERWH 945
Query: 67 IKTQVEASEESALNHVQHPSGEADERVSELCEKAEEKAKEIAKMAEMLVELVWRIERS 124
+ +E ++ + V+ E ++L E E+ +E+A+M L E E+S
Sbjct: 946 LGKTIEKLQKEMADIVEASRTSTLELQNQLDEYKEKNRRELAEMQRQLKEKTLEAEKS 1003
>gi|4504919 keratin 8 [Homo sapiens]
Length = 483
Score = 30.8 bits (68), Expect = 0.29
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 13/90 (14%)
Query: 37 EDIASLIREHGRAYLRTRSKLWEMDNMLIQIKTQVE------ASEESALNHVQHPS---- 86
E++ SL +HG RT++++ EM+ + +++ ++E AS E+A+ +
Sbjct: 287 EELQSLAGKHGDDLRRTKTEISEMNRNISRLQAEIEGLKGQRASLEAAIADAEQRGELAI 346
Query: 87 GEADERVSELCEKAEEKAKEIAKMAEMLVE 116
+A+ ++SEL E A ++AK+ MA L E
Sbjct: 347 KDANAKLSEL-EAALQRAKQ--DMARQLRE 373
>gi|157694505 LINE-1 type transposase domain containing 1 [Homo
sapiens]
Length = 865
Score = 30.8 bits (68), Expect = 0.29
Identities = 24/114 (21%), Positives = 52/114 (45%), Gaps = 23/114 (20%)
Query: 2 RPLDIDEVEAPEEVEVLEPEEDFEQFLLPVINEMREDIASLIREHGRAYLRTRSKLWEMD 61
R L +E+ + E E EE+ ++ I E++E+I +L H S + E++
Sbjct: 595 RTLHTEELTSKEADLTEETEENLRSSVINSIREIKEEIGNLKSSH--------SGVLEIE 646
Query: 62 NMLIQIKTQVEASEESALNHVQHPSGEADERVSELCEKAEEKAKEIAKMAEMLV 115
N + + ++++ E ER+ L ++ EE +K+ +M + ++
Sbjct: 647 NSVDDLSSRMDILE---------------ERIDSLEDQIEEFSKDTMQMTKQII 685
>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
sapiens]
Length = 1983
Score = 30.4 bits (67), Expect = 0.38
Identities = 26/119 (21%), Positives = 61/119 (51%), Gaps = 9/119 (7%)
Query: 10 EAPEEVEVLEPEEDFEQFLLPVINEMREDIASL---IREHGRAYLRTRSK-LWEMDNMLI 65
+A E L+ E+D L + + + + L + E +A LR K + +++ +
Sbjct: 1810 DAAMMAEELKKEQDTSAHLERMKKTLEQTVRELQARLEEAEQAALRGGKKQVQKLEAKVR 1869
Query: 66 QIKTQVEASEESALNHVQHPSG--EADERVSELCEKAEEKAKEIAKMAEMLVELVWRIE 122
+++ +++A ++ H + G + + RV EL +AEE K +A+M +++ +L +++
Sbjct: 1870 ELEAELDAEQKK---HAEALKGVRKHERRVKELAYQAEEDRKNLARMQDLVDKLQSKVK 1925
>gi|122937382 Fas (TNFRSF6) binding factor 1 [Homo sapiens]
Length = 1133
Score = 30.0 bits (66), Expect = 0.50
Identities = 20/120 (16%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 5 DIDEVEAPEEVEVLEPEEDFEQFL--LPVINEMREDIASLIREHGRAYLRTRSKLWEMDN 62
+++ + + +L+ D E+ L L ++ + D A+ H R+ ++ + +
Sbjct: 689 EMERLRELQRASILDMRRDHEEQLQRLKLLKDREVDAATSATSHTRSLNSIIHQMEKFSS 748
Query: 63 MLIQIKTQVEASEESALNHVQHPSGEADERVSELCEKAEEKAKEIAKMAEMLVELVWRIE 122
L ++ ++VEAS + + + DE++ L E+ ++ +++ + E++ ++E
Sbjct: 749 SLHELSSRVEASHLTTSQERELGIRQRDEQLRALQERLGQQQRDMEEERSRQQEVIGKME 808
>gi|4885583 Rho-associated, coiled-coil containing protein kinase 1
[Homo sapiens]
Length = 1354
Score = 29.6 bits (65), Expect = 0.65
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Query: 7 DEVEAPEEVEVLEPEEDFEQFLLPVINEMREDIASLIREHGRAYLRTRSKLWEMDNMLIQ 66
+E + E + LE E+ F + E++E+I RE+ K+ E+ N
Sbjct: 835 NEGQMRELQDQLEAEQYFSTLYKTQVKELKEEIEEKNREN-------LKKIQELQNEKET 887
Query: 67 IKTQVEASEESALNHVQHPSGEADERVSELCEKAEEKAKEIAKMAEMLVELVWRIERSES 126
+ TQ++ +E A + Q G +E+ EL +++++ A + V R+E + S
Sbjct: 888 LATQLDLAETKAESE-QLARGLLEEQYFELTQESKKAASRNRQEITDKDHTVSRLEEANS 946
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 29.6 bits (65), Expect = 0.65
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 7/109 (6%)
Query: 6 IDEVEAPEEVEVLEPEEDFEQFLLPVINEMREDIASLIREHGRAYLRTRSKLWEMDNMLI 65
+ E E P+EV+V EP + E+ P + E S +E + K+ E +
Sbjct: 824 VKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSK-KEEAPKKEAPKPKVEEKKEPAV 882
Query: 66 Q--IKTQVEASEESA--LNHVQHPSGEADERVSELCEKAEEKAK-EIAK 109
+ +++VEA +E A V P EA +V E+ E A+ K K E+AK
Sbjct: 883 EKPKESKVEAKKEEAEDKKKVPTPEKEAPAKV-EVKEDAKPKEKTEVAK 930
Score = 27.3 bits (59), Expect = 3.2
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 2 RPLDIDEVEA--PEEVEVLEPEEDF-EQFLLPVINEMR--EDIASLIREHGRAYLRTRSK 56
+ LD+ EA P + E P + F E+ PV E++ E S ++E +A + K
Sbjct: 757 KTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPK 816
Query: 57 LWEMDNMLIQIKTQVEASEESALNHVQHPSGEADERVSELCEKAEEK 103
E +K+ V+ E+ V+ P +A+E + K EEK
Sbjct: 817 KEE-------VKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEK 856
>gi|189217904 RPGRIP1-like isoform b [Homo sapiens]
Length = 1235
Score = 29.6 bits (65), Expect = 0.65
Identities = 24/122 (19%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 5 DIDEVEAPEEVEVLEPEEDFEQ----FLLPVINEMREDIASLIREHGRAYLRTRSKLWEM 60
DI+ E E + +++ +++ + FL+ V +E+ +D+ +RE + T +L +
Sbjct: 453 DINADELSEALLLIKAQKEQKNGDLSFLVKVDSEINKDLERSMRELQATHAETVQELEKT 512
Query: 61 DNMLI---QIKTQVEASEESALNHVQHPSGEADERVSELCEKAEEKAKEIAKMAEMLVEL 117
NMLI +I + E+ +++ + + +V + + +A I K+ L ++
Sbjct: 513 RNMLIMQHKINKDYQMEVEAVTRKMENLQQDYELKVEQYVHLLDIRAARIHKLEAQLKDI 572
Query: 118 VW 119
+
Sbjct: 573 AY 574
>gi|118442834 RPGRIP1-like isoform a [Homo sapiens]
Length = 1315
Score = 29.6 bits (65), Expect = 0.65
Identities = 24/122 (19%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 5 DIDEVEAPEEVEVLEPEEDFEQ----FLLPVINEMREDIASLIREHGRAYLRTRSKLWEM 60
DI+ E E + +++ +++ + FL+ V +E+ +D+ +RE + T +L +
Sbjct: 453 DINADELSEALLLIKAQKEQKNGDLSFLVKVDSEINKDLERSMRELQATHAETVQELEKT 512
Query: 61 DNMLI---QIKTQVEASEESALNHVQHPSGEADERVSELCEKAEEKAKEIAKMAEMLVEL 117
NMLI +I + E+ +++ + + +V + + +A I K+ L ++
Sbjct: 513 RNMLIMQHKINKDYQMEVEAVTRKMENLQQDYELKVEQYVHLLDIRAARIHKLEAQLKDI 572
Query: 118 VW 119
+
Sbjct: 573 AY 574
>gi|23943912 phosphoinositide-3-kinase, regulatory subunit 4 [Homo
sapiens]
Length = 1358
Score = 29.3 bits (64), Expect = 0.85
Identities = 22/98 (22%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 24 FEQFLLPVINEMREDIASLIREHGRAYLRTRSKLWEMDNMLIQIKTQVEASEESALNH-- 81
+ +++LP I + +D A+++R AY + L E +++ + E+ N+
Sbjct: 459 YPEYILPGIAHLAQDDATIVR---LAYAENIALLAETALRFLELVQLKNLNMENDPNNEE 515
Query: 82 ---VQHPSGEADERVSELCEKAEEKAKEIAKMAEMLVE 116
V HP+G D + L E ++K + E +V+
Sbjct: 516 IDEVTHPNGNYDTELQALHEMVQQKVVTLLSDPENIVK 553
>gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens]
Length = 1946
Score = 29.3 bits (64), Expect = 0.85
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 37 EDIASLIREHGRAYLRTRSKLWEMD---NMLIQIKTQVEASEESALNHVQHPSGEADERV 93
ED+ SL + R + +L E N+ T + + ++ V EA+E V
Sbjct: 1698 EDLRSLQEQTERGRRLSEEELLEATERINLFYTQNTSLLSQKKKLEADVARMQKEAEEVV 1757
Query: 94 SELCEKAEEKAKEIAKMAEMLVE 116
E C+ AEEKAK+ A A L E
Sbjct: 1758 QE-CQNAEEKAKKAAIEAANLSE 1779
>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
Length = 793
Score = 29.3 bits (64), Expect = 0.85
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 59 EMDNMLIQIKTQVEASEESALNHVQHPSGEADERVSELCEKAEEKAKEIAKMAEMLVELV 118
E D + + ++EA E++A + E ER+ E ++A E+ + I + + E
Sbjct: 283 EQDKKIADERARIEAEEKAAAQERERREAEERERMREEEKRAAEERQRIKEEEKRAAEER 342
Query: 119 WRIERSE 125
RI+ E
Sbjct: 343 QRIKEEE 349
>gi|122937398 dynein, cytoplasmic 2, heavy chain 1 [Homo sapiens]
Length = 4314
Score = 28.9 bits (63), Expect = 1.1
Identities = 11/35 (31%), Positives = 24/35 (68%)
Query: 82 VQHPSGEADERVSELCEKAEEKAKEIAKMAEMLVE 116
+QH + +E+ ++L ++ E+K ++AK+ E L+E
Sbjct: 3415 IQHEKPDLEEQKTKLLQQEEDKKIQLAKLEESLLE 3449
>gi|109255249 keratin 4 [Homo sapiens]
Length = 594
Score = 28.9 bits (63), Expect = 1.1
Identities = 22/122 (18%), Positives = 54/122 (44%), Gaps = 1/122 (0%)
Query: 2 RPLDIDEVEAPEEVEVLEPEEDFEQFLLPVINEMREDIASLIREHGRAYLRTRSKLWEMD 61
R LD+D + A + E + + + + + + +HG T+S++ E++
Sbjct: 374 RNLDLDSIIAEVRAQYEEIAQRSKAEAEALYQTKVQQLQISVDQHGDNLKNTKSEIAELN 433
Query: 62 NMLIQIKTQVEASEESALNHVQHPSGEADERVSELCEKAEEKAKEIAKMAEMLVELVWRI 121
M+ +++ ++E ++ +Q +A++R + A K E+ + E + R+
Sbjct: 434 RMIQRLRAEIENIKKQC-QTLQVSVADAEQRGENALKDAHSKRVELEAALQQAKEELARM 492
Query: 122 ER 123
R
Sbjct: 493 LR 494
>gi|198442834 coiled-coil domain containing 152 [Homo sapiens]
Length = 254
Score = 28.9 bits (63), Expect = 1.1
Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 14/90 (15%)
Query: 21 EEDFEQFLLPVINEMREDIASLIREHGRAYLRTRSKLWEMDNMLIQIKTQVEASEESALN 80
E++++ + +++EM+ I+E G Y + SKL++ ++ +VE +EE
Sbjct: 108 EQEYKNNIAKLVSEMK------IKEEG--YKKEISKLYQ------DMQRKVELNEEKHKE 153
Query: 81 HVQHPSGEADERVSELCEKAEEKAKEIAKM 110
++ E E ++L + +EK EI K+
Sbjct: 154 LIEKKEMEISELNAKLRSQEKEKQNEIIKL 183
>gi|157502225 Janus kinase and microtubule interacting protein 3
[Homo sapiens]
Length = 844
Score = 28.5 bits (62), Expect = 1.5
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 6 IDEVEAPEEVEVLEPEEDFEQFLLPVINEMREDIASLIREHGRAYLRTRSKLWEMDNMLI 65
+ E+ + EE E L+ EQ+ V++E+RE A ++RE + ++ E++ +
Sbjct: 759 VAELLSEEEREKLKVA--VEQWKRQVMSELRERDAQILRERMELLQLAQQRIKELEERIE 816
Query: 66 QIKTQVEASEESAL 79
K Q++ EE L
Sbjct: 817 AQKRQIKELEEKFL 830
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.128 0.346
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,426,275
Number of Sequences: 37866
Number of extensions: 164551
Number of successful extensions: 860
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 800
Number of HSP's gapped (non-prelim): 153
length of query: 127
length of database: 18,247,518
effective HSP length: 90
effective length of query: 37
effective length of database: 14,839,578
effective search space: 549064386
effective search space used: 549064386
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.