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Search of human proteins with 40806164
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40806164 ubiquitin-conjugating enzyme E2 variant 1 isoform a
[Homo sapiens]
(170 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40806164 ubiquitin-conjugating enzyme E2 variant 1 isoform a ... 352 1e-97
gi|40806167 ubiquitin-conjugating enzyme E2 variant 1 isoform a ... 352 1e-97
gi|40806190 TMEM189-UBE2V1 readthrough transcript [Homo sapiens] 291 2e-79
gi|73765546 ubiquitin-conjugating enzyme E2 variant 1 isoform d ... 291 2e-79
gi|4507797 ubiquitin-conjugating enzyme E2v2 [Homo sapiens] 269 1e-72
gi|12025663 ubiquitin-conjugating enzyme E2 variant 1 isoform c ... 189 8e-49
gi|163660385 ubiquitin-conjugating enzyme E2K isoform 2 [Homo sa... 55 4e-08
gi|4885417 ubiquitin-conjugating enzyme E2K isoform 1 [Homo sapi... 55 4e-08
gi|13489085 ubiquitin-conjugating enzyme E2G 1 [Homo sapiens] 50 9e-07
gi|4507779 ubiquitin-conjugating enzyme E2E 1 isoform 1 [Homo sa... 49 2e-06
gi|33359691 ubiquitin-conjugating enzyme E2E 1 isoform 2 [Homo s... 48 4e-06
gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo sap... 47 6e-06
gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens] 47 6e-06
gi|22749327 ubiquitin-conjugating enzyme E2E 2 [Homo sapiens] 47 8e-06
gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens] 45 3e-05
gi|5902146 ubiquitin-conjugating enzyme E2C isoform 1 [Homo sapi... 45 4e-05
gi|32967289 ubiquitin-conjugating enzyme E2C isoform 4 [Homo sap... 45 4e-05
gi|32967287 ubiquitin-conjugating enzyme E2C isoform 4 [Homo sap... 45 4e-05
gi|7661808 ubiquitin-conjugating enzyme E2T [Homo sapiens] 45 4e-05
gi|33359694 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens] 44 7e-05
gi|5454146 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens] 44 7e-05
gi|22212943 ubiquitin-conjugating enzyme UBC3B [Homo sapiens] 42 3e-04
gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo s... 41 4e-04
gi|16357477 ubiquitin-conjugating enzyme Cdc34 [Homo sapiens] 40 0.001
gi|4759282 ubiquitin-conjugating enzyme E2L 6 isoform 1 [Homo sa... 40 0.001
gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo s... 40 0.001
gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo sa... 40 0.001
gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo s... 40 0.001
gi|33149322 ubiquitin-conjugating enzyme E2D 3 isoform 2 [Homo s... 40 0.001
gi|33149320 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 40 0.001
>gi|40806164 ubiquitin-conjugating enzyme E2 variant 1 isoform a
[Homo sapiens]
Length = 170
Score = 352 bits (902), Expect = 1e-97
Identities = 170/170 (100%), Positives = 170/170 (100%)
Query: 1 MPGEVQASYLKSQSKLSDEGRLEPRKFHCKGVKVPRNFRLLEELEEGQKGVGDGTVSWGL 60
MPGEVQASYLKSQSKLSDEGRLEPRKFHCKGVKVPRNFRLLEELEEGQKGVGDGTVSWGL
Sbjct: 1 MPGEVQASYLKSQSKLSDEGRLEPRKFHCKGVKVPRNFRLLEELEEGQKGVGDGTVSWGL 60
Query: 61 EDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSN 120
EDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSN
Sbjct: 61 EDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSN 120
Query: 121 GVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN 170
GVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN
Sbjct: 121 GVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN 170
>gi|40806167 ubiquitin-conjugating enzyme E2 variant 1 isoform a
[Homo sapiens]
Length = 170
Score = 352 bits (902), Expect = 1e-97
Identities = 170/170 (100%), Positives = 170/170 (100%)
Query: 1 MPGEVQASYLKSQSKLSDEGRLEPRKFHCKGVKVPRNFRLLEELEEGQKGVGDGTVSWGL 60
MPGEVQASYLKSQSKLSDEGRLEPRKFHCKGVKVPRNFRLLEELEEGQKGVGDGTVSWGL
Sbjct: 1 MPGEVQASYLKSQSKLSDEGRLEPRKFHCKGVKVPRNFRLLEELEEGQKGVGDGTVSWGL 60
Query: 61 EDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSN 120
EDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSN
Sbjct: 61 EDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSN 120
Query: 121 GVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN 170
GVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN
Sbjct: 121 GVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN 170
>gi|40806190 TMEM189-UBE2V1 readthrough transcript [Homo sapiens]
Length = 370
Score = 291 bits (744), Expect = 2e-79
Identities = 140/140 (100%), Positives = 140/140 (100%)
Query: 31 GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSL 90
GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSL
Sbjct: 231 GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSL 290
Query: 91 KIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRL 150
KIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRL
Sbjct: 291 KIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRL 350
Query: 151 MMSKENMKLPQPPEGQCYSN 170
MMSKENMKLPQPPEGQCYSN
Sbjct: 351 MMSKENMKLPQPPEGQCYSN 370
>gi|73765546 ubiquitin-conjugating enzyme E2 variant 1 isoform d
[Homo sapiens]
Length = 147
Score = 291 bits (744), Expect = 2e-79
Identities = 140/140 (100%), Positives = 140/140 (100%)
Query: 31 GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSL 90
GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSL
Sbjct: 8 GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSL 67
Query: 91 KIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRL 150
KIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRL
Sbjct: 68 KIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRL 127
Query: 151 MMSKENMKLPQPPEGQCYSN 170
MMSKENMKLPQPPEGQCYSN
Sbjct: 128 MMSKENMKLPQPPEGQCYSN 147
>gi|4507797 ubiquitin-conjugating enzyme E2v2 [Homo sapiens]
Length = 145
Score = 269 bits (687), Expect = 1e-72
Identities = 128/140 (91%), Positives = 135/140 (96%)
Query: 31 GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSL 90
GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRT YENRIYSL
Sbjct: 6 GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSL 65
Query: 91 KIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRL 150
K+ECGPKYPEAPP VRFVTKINMNG+N+S+G+VD R+I VLAKWQNSYSIKVVLQELRRL
Sbjct: 66 KVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRRL 125
Query: 151 MMSKENMKLPQPPEGQCYSN 170
MMSKENMKLPQPPEGQ Y+N
Sbjct: 126 MMSKENMKLPQPPEGQTYNN 145
>gi|12025663 ubiquitin-conjugating enzyme E2 variant 1 isoform c
[Homo sapiens]
Length = 103
Score = 189 bits (481), Expect = 8e-49
Identities = 94/107 (87%), Positives = 97/107 (90%), Gaps = 6/107 (5%)
Query: 64 EDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVV 123
ED+ L +T +TIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVV
Sbjct: 3 EDLNLENFTA------KTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVV 56
Query: 124 DPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN 170
DPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN
Sbjct: 57 DPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN 103
>gi|163660385 ubiquitin-conjugating enzyme E2K isoform 2 [Homo
sapiens]
Length = 157
Score = 54.7 bits (130), Expect = 4e-08
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 65 DMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVD 124
D T G I GPP T YE Y L+I+ YP PP VRF+TKI ++S G +
Sbjct: 33 DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAI- 91
Query: 125 PRAISVLA-KWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN 170
+ +L +W + +++ VL L+ L+ + E P P+ +N
Sbjct: 92 --CLDILKDQWAAAMTLRTVLLSLQALLAAAE----PDDPQDAVVAN 132
>gi|4885417 ubiquitin-conjugating enzyme E2K isoform 1 [Homo
sapiens]
Length = 200
Score = 54.7 bits (130), Expect = 4e-08
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 65 DMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVD 124
D T G I GPP T YE Y L+I+ YP PP VRF+TKI ++S G +
Sbjct: 33 DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAI- 91
Query: 125 PRAISVLA-KWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN 170
+ +L +W + +++ VL L+ L+ + E P P+ +N
Sbjct: 92 --CLDILKDQWAAAMTLRTVLLSLQALLAAAE----PDDPQDAVVAN 132
>gi|13489085 ubiquitin-conjugating enzyme E2G 1 [Homo sapiens]
Length = 170
Score = 50.1 bits (118), Expect = 9e-07
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 40 LLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYP 99
L +L E K +G S GL DD D L RW +IIGPP T+YE ++ + YP
Sbjct: 10 LRRQLAELNKNPVEG-FSAGLIDDND--LYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYP 66
Query: 100 EAPPFVRFVTKINMNGVNSSNGV 122
PP ++F+T+I V+ + V
Sbjct: 67 LRPPKMKFITEIWHPNVDKNGDV 89
>gi|4507779 ubiquitin-conjugating enzyme E2E 1 isoform 1 [Homo
sapiens]
Length = 193
Score = 48.9 bits (115), Expect = 2e-06
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 16/153 (10%)
Query: 7 ASYLKSQSKLSDEGRLEPRKFHCKGVKVPRNFRLLE-ELEEGQKGVGDGTV------SWG 59
+S S ++ +++ P+K K V + +N +LL + QK + D T+ S G
Sbjct: 12 SSSSSSSNQQTEKETNTPKKKESK-VSMSKNSKLLSTSAKRIQKELADITLDPPPNCSAG 70
Query: 60 LEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSS 119
+ D + W I+GPP ++YE ++ L I P+YP PP V F T+I +N S
Sbjct: 71 PKGDN---IYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNIN-S 126
Query: 120 NGVVDPRAISVLA-KWQNSYSIKVVLQELRRLM 151
GV+ + +L W + +I VL + L+
Sbjct: 127 QGVI---CLDILKDNWSPALTISKVLLSICSLL 156
>gi|33359691 ubiquitin-conjugating enzyme E2E 1 isoform 2 [Homo
sapiens]
Length = 176
Score = 48.1 bits (113), Expect = 4e-06
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 19/146 (13%)
Query: 7 ASYLKSQSKLSDEGRLEPRKFHCKGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDM 66
+S S ++ +++ P+K K V + +N +LL + GD
Sbjct: 12 SSSSSSSNQQTEKETNTPKKKESK-VSMSKNSKLLSTSAKSAGPKGDN------------ 58
Query: 67 TLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPR 126
+ W I+GPP ++YE ++ L I P+YP PP V F T+I +N S GV+
Sbjct: 59 -IYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNIN-SQGVI--- 113
Query: 127 AISVLA-KWQNSYSIKVVLQELRRLM 151
+ +L W + +I VL + L+
Sbjct: 114 CLDILKDNWSPALTISKVLLSICSLL 139
>gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo
sapiens]
Length = 152
Score = 47.4 bits (111), Expect = 6e-06
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 9/121 (7%)
Query: 32 VKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLK 91
+ P RL+ + + Q+ G VS ++ M W +I GP T +E+ + L
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPAG-VSGAPSENNIMV---WNAVIFGPEGTPFEDGTFKLT 56
Query: 92 IECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLA-KWQNSYSIKVVLQELRRL 150
IE +YP PP VRFV+K+ V + + + +L +W +Y + +L ++ L
Sbjct: 57 IEFTEEYPNKPPTVRFVSKMFHPNVYADGSI----CLDILQNRWSPTYDVSSILTSIQSL 112
Query: 151 M 151
+
Sbjct: 113 L 113
>gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens]
Length = 152
Score = 47.4 bits (111), Expect = 6e-06
Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 9/121 (7%)
Query: 32 VKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLK 91
+ P RL+ + + Q+ G E++ + +W +I GP T +E+ + L
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENN----IMQWNAVIFGPEGTPFEDGTFKLV 56
Query: 92 IECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLA-KWQNSYSIKVVLQELRRL 150
IE +YP PP VRF++K+ V + + + +L +W +Y + +L ++ L
Sbjct: 57 IEFSEEYPNKPPTVRFLSKMFHPNVYADGSI----CLDILQNRWSPTYDVSSILTSIQSL 112
Query: 151 M 151
+
Sbjct: 113 L 113
>gi|22749327 ubiquitin-conjugating enzyme E2E 2 [Homo sapiens]
Length = 201
Score = 47.0 bits (110), Expect = 8e-06
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 71 WTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISV 130
W I+GPP ++YE ++ L I P YP PP V F T+I +N S GV+ + +
Sbjct: 87 WRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNIN-SQGVI---CLDI 142
Query: 131 LA-KWQNSYSIKVVLQELRRLM 151
L W + +I VL + L+
Sbjct: 143 LKDNWSPALTISKVLLSICSLL 164
>gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens]
Length = 147
Score = 45.1 bits (105), Expect = 3e-05
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 39 RLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKY 98
R+ +EL + Q+ + + DD L W I+GPP + Y+ ++ L + Y
Sbjct: 5 RIQKELSDLQRDPPAHCSAGPVGDD----LFHWQATIMGPPDSAYQGGVFFLTVHFPTDY 60
Query: 99 PEAPPFVRFVTKINMNGVNSSNGVVDPRAISVL-AKWQNSYSIKVVLQELRRLM 151
P PP + F TKI +NS+ + + +L ++W + ++ VL + L+
Sbjct: 61 PFKPPKIAFTTKIYHPNINSNGSI----CLDILRSQWSPALTVSKVLLSICSLL 110
>gi|5902146 ubiquitin-conjugating enzyme E2C isoform 1 [Homo
sapiens]
Length = 179
Score = 44.7 bits (104), Expect = 4e-05
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 52 GDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKI 111
GD +S E D L +W G I G T+YE+ Y L +E YP P V+F+T
Sbjct: 46 GDKGISAFPESDN---LFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPC 102
Query: 112 NMNGVNSSNGVVDPRAISVL-AKWQNSYSIKVVLQELRRLM 151
V++ + + +L KW Y ++ +L ++ L+
Sbjct: 103 YHPNVDTQGNI----CLDILKEKWSALYDVRTILLSIQSLL 139
>gi|32967289 ubiquitin-conjugating enzyme E2C isoform 4 [Homo
sapiens]
Length = 140
Score = 44.7 bits (104), Expect = 4e-05
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 52 GDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKI 111
GD +S E D L +W G I G T+YE+ Y L +E YP P V+F+T
Sbjct: 7 GDKGISAFPESDN---LFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPC 63
Query: 112 NMNGVNSSNGVVDPRAISVL-AKWQNSYSIKVVLQELRRLM 151
V++ + + +L KW Y ++ +L ++ L+
Sbjct: 64 YHPNVDTQGNI----CLDILKEKWSALYDVRTILLSIQSLL 100
>gi|32967287 ubiquitin-conjugating enzyme E2C isoform 4 [Homo
sapiens]
Length = 140
Score = 44.7 bits (104), Expect = 4e-05
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 52 GDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKI 111
GD +S E D L +W G I G T+YE+ Y L +E YP P V+F+T
Sbjct: 7 GDKGISAFPESDN---LFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPC 63
Query: 112 NMNGVNSSNGVVDPRAISVL-AKWQNSYSIKVVLQELRRLM 151
V++ + + +L KW Y ++ +L ++ L+
Sbjct: 64 YHPNVDTQGNI----CLDILKEKWSALYDVRTILLSIQSLL 100
>gi|7661808 ubiquitin-conjugating enzyme E2T [Homo sapiens]
Length = 197
Score = 44.7 bits (104), Expect = 4e-05
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 36 RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECG 95
R RL EL G W +D + M R I+G T YE ++ L++
Sbjct: 3 RASRLKRELHMLATEPPPGITCW--QDKDQMDDLR--AQILGGANTPYEKGVFKLEVIIP 58
Query: 96 PKYPEAPPFVRFVTKINMNGVNSSNGV-VDPRAISVLAKWQNSYSIKVVLQELRRLMMSK 154
+YP PP +RF+T I ++S+ + +D + W+ S +I VL + +L+MS+
Sbjct: 59 ERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSI-QLLMSE 117
Query: 155 EN 156
N
Sbjct: 118 PN 119
>gi|33359694 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]
Length = 207
Score = 43.9 bits (102), Expect = 7e-05
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 71 WTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISV 130
W I+GPP ++YE ++ L I YP PP V F T+I +N S GV+ + +
Sbjct: 93 WRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNIN-SQGVI---CLDI 148
Query: 131 LA-KWQNSYSIKVVLQELRRLM 151
L W + +I VL + L+
Sbjct: 149 LKDNWSPALTISKVLLSICSLL 170
>gi|5454146 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]
Length = 207
Score = 43.9 bits (102), Expect = 7e-05
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 71 WTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISV 130
W I+GPP ++YE ++ L I YP PP V F T+I +N S GV+ + +
Sbjct: 93 WRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNIN-SQGVI---CLDI 148
Query: 131 LA-KWQNSYSIKVVLQELRRLM 151
L W + +I VL + L+
Sbjct: 149 LKDNWSPALTISKVLLSICSLL 170
>gi|22212943 ubiquitin-conjugating enzyme UBC3B [Homo sapiens]
Length = 238
Score = 41.6 bits (96), Expect = 3e-04
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 60 LEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKI 111
L D+ D L W I GPP T+YE + I+ YP +PP RF+TK+
Sbjct: 32 LVDESD--LYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKM 81
>gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo
sapiens]
Length = 147
Score = 41.2 bits (95), Expect = 4e-04
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 68 LTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRA 127
L W I+GP + Y+ ++ L I YP PP V F TKI +NS+ +
Sbjct: 30 LFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSI----C 85
Query: 128 ISVL-AKWQNSYSIKVVLQELRRLM 151
+ +L ++W + ++ VL + L+
Sbjct: 86 LDILRSQWSPALTVSKVLLSICSLL 110
>gi|16357477 ubiquitin-conjugating enzyme Cdc34 [Homo sapiens]
Length = 236
Score = 40.0 bits (92), Expect = 0.001
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 60 LEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKI 111
L D+ D L W I GPP T YE + +++ YP +PP RF+TK+
Sbjct: 32 LVDEGD--LYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKM 81
>gi|4759282 ubiquitin-conjugating enzyme E2L 6 isoform 1 [Homo
sapiens]
Length = 153
Score = 40.0 bits (92), Expect = 0.001
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Query: 37 NFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGP 96
+ R+++ELE+ QK + +D + W +++ P + Y + ++L+I P
Sbjct: 4 SMRVVKELEDLQKKPPPYLRNLS---SDDANVLVWHALLL-PDQPPYHLKAFNLRISFPP 59
Query: 97 KYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKEN 156
+YP PP ++F TKI V+ + + P I W+ VL+ L +++++ N
Sbjct: 60 EYPFKPPMIKFTTKIYHPNVDENGQICLP--IISSENWKPCTKTCQVLEAL-NVLVNRPN 116
Query: 157 MKLP 160
++ P
Sbjct: 117 IREP 120
>gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo
sapiens]
Length = 118
Score = 39.7 bits (91), Expect = 0.001
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 71 WTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISV 130
W I+GP + Y+ ++ L I YP PP V F T+I +NS+ + + +
Sbjct: 4 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI----CLDI 59
Query: 131 L-AKWQNSYSIKVVLQELRRLM 151
L ++W + +I VL + L+
Sbjct: 60 LRSQWSPALTISKVLLSICSLL 81
>gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo
sapiens]
Length = 147
Score = 39.7 bits (91), Expect = 0.001
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 71 WTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISV 130
W I+GP + Y+ ++ L I YP PP V F T+I +NS+ + + +
Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI----CLDI 88
Query: 131 L-AKWQNSYSIKVVLQELRRLM 151
L ++W + +I VL + L+
Sbjct: 89 LRSQWSPALTISKVLLSICSLL 110
>gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo
sapiens]
Length = 149
Score = 39.7 bits (91), Expect = 0.001
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 71 WTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISV 130
W I+GP + Y+ ++ L I YP PP V F T+I +NS+ + + +
Sbjct: 35 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI----CLDI 90
Query: 131 L-AKWQNSYSIKVVLQELRRLM 151
L ++W + +I VL + L+
Sbjct: 91 LRSQWSPALTISKVLLSICSLL 112
>gi|33149322 ubiquitin-conjugating enzyme E2D 3 isoform 2 [Homo
sapiens]
Length = 148
Score = 39.7 bits (91), Expect = 0.001
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 71 WTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISV 130
W I+GP + Y+ ++ L I YP PP V F T+I +NS+ + + +
Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI----CLDI 88
Query: 131 L-AKWQNSYSIKVVLQELRRLM 151
L ++W + +I VL + L+
Sbjct: 89 LRSQWSPALTISKVLLSICSLL 110
>gi|33149320 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 39.7 bits (91), Expect = 0.001
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 71 WTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISV 130
W I+GP + Y+ ++ L I YP PP V F T+I +NS+ + + +
Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI----CLDI 88
Query: 131 L-AKWQNSYSIKVVLQELRRLM 151
L ++W + +I VL + L+
Sbjct: 89 LRSQWSPALTISKVLLSICSLL 110
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.135 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,566,632
Number of Sequences: 37866
Number of extensions: 326895
Number of successful extensions: 559
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 503
Number of HSP's gapped (non-prelim): 62
length of query: 170
length of database: 18,247,518
effective HSP length: 95
effective length of query: 75
effective length of database: 14,650,248
effective search space: 1098768600
effective search space used: 1098768600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.