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Search of human proteins with 40805860
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40805860 tumor protein D52-like 2 isoform e [Homo sapiens]
(206 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40805860 tumor protein D52-like 2 isoform e [Homo sapiens] 401 e-112
gi|40805868 tumor protein D52-like 2 isoform c [Homo sapiens] 391 e-109
gi|40805864 tumor protein D52-like 2 isoform a [Homo sapiens] 388 e-108
gi|40805862 tumor protein D52-like 2 isoform f [Homo sapiens] 348 1e-96
gi|40805870 tumor protein D52-like 2 isoform d [Homo sapiens] 339 1e-93
gi|40805866 tumor protein D52-like 2 isoform b [Homo sapiens] 335 1e-92
gi|4827038 tumor protein D52 isoform 3 [Homo sapiens] 159 2e-39
gi|70608172 tumor protein D52 isoform 1 [Homo sapiens] 159 2e-39
gi|70608174 tumor protein D52 isoform 2 [Homo sapiens] 149 2e-36
gi|51173744 tumor protein D52-like 1 isoform 2 [Homo sapiens] 140 8e-34
gi|4507641 tumor protein D52-like 1 isoform 1 [Homo sapiens] 140 8e-34
gi|49574214 protein kinase NYD-SP25 isoform 1 [Homo sapiens] 139 1e-33
gi|49574216 protein kinase NYD-SP25 isoform 3 [Homo sapiens] 125 2e-29
gi|49574212 protein kinase NYD-SP25 isoform 2 [Homo sapiens] 125 2e-29
gi|51173748 tumor protein D52-like 1 isoform 4 [Homo sapiens] 123 1e-28
gi|51173746 tumor protein D52-like 1 isoform 3 [Homo sapiens] 121 4e-28
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [... 38 0.007
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 37 0.015
gi|205277396 dynactin 1 isoform 4 [Homo sapiens] 36 0.020
gi|205277392 dynactin 1 isoform 3 [Homo sapiens] 36 0.020
gi|13259508 dynactin 1 isoform 2 [Homo sapiens] 36 0.020
gi|13259510 dynactin 1 isoform 1 [Homo sapiens] 36 0.020
gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo sap... 33 0.13
gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens] 33 0.13
gi|56550047 uveal autoantigen with coiled-coil domains and ankyr... 33 0.22
gi|59850762 uveal autoantigen with coiled-coil domains and ankyr... 33 0.22
gi|55770878 neuronal pentraxin I precursor [Homo sapiens] 32 0.29
gi|30089940 Golgi autoantigen, golgin subfamily a, 3 [Homo sapiens] 32 0.29
gi|145312241 differentially expressed in FDCP 6 homolog [Homo sa... 32 0.50
gi|33188435 deleted in liver cancer 1 isoform 3 [Homo sapiens] 32 0.50
>gi|40805860 tumor protein D52-like 2 isoform e [Homo sapiens]
Length = 206
Score = 401 bits (1030), Expect = e-112
Identities = 206/206 (100%), Positives = 206/206 (100%)
Query: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
Sbjct: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV
Sbjct: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
Query: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVG 180
TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVG
Sbjct: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVG 180
Query: 181 DRENGSDNLPSSAGSGDKPLSDPAPF 206
DRENGSDNLPSSAGSGDKPLSDPAPF
Sbjct: 181 DRENGSDNLPSSAGSGDKPLSDPAPF 206
>gi|40805868 tumor protein D52-like 2 isoform c [Homo sapiens]
Length = 220
Score = 391 bits (1005), Expect = e-109
Identities = 206/220 (93%), Positives = 206/220 (93%), Gaps = 14/220 (6%)
Query: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
Sbjct: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV
Sbjct: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
Query: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGD--------------MRNSATFKS 166
TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGD MRNSATFKS
Sbjct: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMSSYSIRHSISMPAMRNSATFKS 180
Query: 167 FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 206
FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF
Sbjct: 181 FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 220
>gi|40805864 tumor protein D52-like 2 isoform a [Homo sapiens]
Length = 229
Score = 388 bits (996), Expect = e-108
Identities = 206/229 (89%), Positives = 206/229 (89%), Gaps = 23/229 (10%)
Query: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
Sbjct: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV
Sbjct: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
Query: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGD----------------------- 157
TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGD
Sbjct: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRAHPFSHSFSSYSIRHSISMPA 180
Query: 158 MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 206
MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF
Sbjct: 181 MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 229
>gi|40805862 tumor protein D52-like 2 isoform f [Homo sapiens]
Length = 186
Score = 348 bits (894), Expect = 1e-96
Identities = 186/206 (90%), Positives = 186/206 (90%), Gaps = 20/206 (9%)
Query: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
Sbjct: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSA
Sbjct: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSA--------------- 105
Query: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVG 180
YKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVG
Sbjct: 106 -----YKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVG 160
Query: 181 DRENGSDNLPSSAGSGDKPLSDPAPF 206
DRENGSDNLPSSAGSGDKPLSDPAPF
Sbjct: 161 DRENGSDNLPSSAGSGDKPLSDPAPF 186
>gi|40805870 tumor protein D52-like 2 isoform d [Homo sapiens]
Length = 200
Score = 339 bits (869), Expect = 1e-93
Identities = 186/220 (84%), Positives = 186/220 (84%), Gaps = 34/220 (15%)
Query: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
Sbjct: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSA
Sbjct: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSA--------------- 105
Query: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGD--------------MRNSATFKS 166
YKKTQETLSQAGQKTSAALSTVGSAISRKLGD MRNSATFKS
Sbjct: 106 -----YKKTQETLSQAGQKTSAALSTVGSAISRKLGDMSSYSIRHSISMPAMRNSATFKS 160
Query: 167 FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 206
FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF
Sbjct: 161 FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 200
>gi|40805866 tumor protein D52-like 2 isoform b [Homo sapiens]
Length = 209
Score = 335 bits (860), Expect = 1e-92
Identities = 186/229 (81%), Positives = 186/229 (81%), Gaps = 43/229 (18%)
Query: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
Sbjct: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSA
Sbjct: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSA--------------- 105
Query: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGD----------------------- 157
YKKTQETLSQAGQKTSAALSTVGSAISRKLGD
Sbjct: 106 -----YKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRAHPFSHSFSSYSIRHSISMPA 160
Query: 158 MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 206
MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF
Sbjct: 161 MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 209
>gi|4827038 tumor protein D52 isoform 3 [Homo sapiens]
Length = 184
Score = 159 bits (402), Expect = 2e-39
Identities = 90/177 (50%), Positives = 116/177 (65%), Gaps = 22/177 (12%)
Query: 31 VAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELK 90
VAA A E L+E E+EELR EL KVEEEI TL QVLAAKE+H E+KR+LG+++L ELK
Sbjct: 21 VAATISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELK 80
Query: 91 QNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTVGSA 150
QN+++ W DV +SAY KKT ETLSQAGQK SAA S+VGS
Sbjct: 81 QNIAKGWQDVTATSAY--------------------KKTSETLSQAGQKASAAFSSVGSV 120
Query: 151 ISRKLGDMRNSATFKSFEDRVGTIKSKVVGDRENGSD--NLPSSAGSGDKPLSDPAP 205
I++KL D++NS TFKSFE++V +KSKV G + G D + +SA + ++P P
Sbjct: 121 ITKKLEDVKNSPTFKSFEEKVENLKSKVGGTKPAGGDFGEVLNSAANASATTTEPLP 177
>gi|70608172 tumor protein D52 isoform 1 [Homo sapiens]
Length = 224
Score = 159 bits (402), Expect = 2e-39
Identities = 90/177 (50%), Positives = 116/177 (65%), Gaps = 22/177 (12%)
Query: 31 VAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELK 90
VAA A E L+E E+EELR EL KVEEEI TL QVLAAKE+H E+KR+LG+++L ELK
Sbjct: 61 VAATISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELK 120
Query: 91 QNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTVGSA 150
QN+++ W DV +SAY KKT ETLSQAGQK SAA S+VGS
Sbjct: 121 QNIAKGWQDVTATSAY--------------------KKTSETLSQAGQKASAAFSSVGSV 160
Query: 151 ISRKLGDMRNSATFKSFEDRVGTIKSKVVGDRENGSD--NLPSSAGSGDKPLSDPAP 205
I++KL D++NS TFKSFE++V +KSKV G + G D + +SA + ++P P
Sbjct: 161 ITKKLEDVKNSPTFKSFEEKVENLKSKVGGTKPAGGDFGEVLNSAANASATTTEPLP 217
>gi|70608174 tumor protein D52 isoform 2 [Homo sapiens]
Length = 207
Score = 149 bits (375), Expect = 2e-36
Identities = 92/200 (46%), Positives = 116/200 (58%), Gaps = 45/200 (22%)
Query: 31 VAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELK 90
VAA A E L+E E+EELR EL KVEEEI TL QVLAAKE+H E+KR+LG+++L ELK
Sbjct: 21 VAATISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELK 80
Query: 91 QNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTVGSA 150
QN+++ W DV +SAY KKT ETLSQAGQK SAA S+VGS
Sbjct: 81 QNIAKGWQDVTATSAY--------------------KKTSETLSQAGQKASAAFSSVGSV 120
Query: 151 ISRKLGD-----------------------MRNSATFKSFEDRVGTIKSKVVGDRENGSD 187
I++KL D MRNS TFKSFE++V +KSKV G + G D
Sbjct: 121 ITKKLEDVKLQAFSHSFSIRSIQHSISMPAMRNSPTFKSFEEKVENLKSKVGGTKPAGGD 180
Query: 188 --NLPSSAGSGDKPLSDPAP 205
+ +SA + ++P P
Sbjct: 181 FGEVLNSAANASATTTEPLP 200
>gi|51173744 tumor protein D52-like 1 isoform 2 [Homo sapiens]
Length = 175
Score = 140 bits (353), Expect = 8e-34
Identities = 81/162 (50%), Positives = 104/162 (64%), Gaps = 37/162 (22%)
Query: 41 LTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDV 100
L+E E+EEL+AEL ++E+EI TLRQVL+AKERH E+K++LG++ + ELKQN S+SWHD+
Sbjct: 2 LSEEEKEELKAELVQLEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSKSWHDM 61
Query: 101 QVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGD--- 157
Q ++A YKKT ETLS AGQK +AA S VG+AIS+K GD
Sbjct: 62 QTTTA--------------------YKKTHETLSHAGQKATAAFSNVGTAISKKFGDMSY 101
Query: 158 ----------MRNSATFKSFEDRVGT----IKSKVVGDRENG 185
MRNS TFKSFE+RV T +K+KV G NG
Sbjct: 102 SIRHSISMPAMRNSPTFKSFEERVETTVTSLKTKVGGTNPNG 143
>gi|4507641 tumor protein D52-like 1 isoform 1 [Homo sapiens]
Length = 204
Score = 140 bits (353), Expect = 8e-34
Identities = 81/162 (50%), Positives = 104/162 (64%), Gaps = 37/162 (22%)
Query: 41 LTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDV 100
L+E E+EEL+AEL ++E+EI TLRQVL+AKERH E+K++LG++ + ELKQN S+SWHD+
Sbjct: 31 LSEEEKEELKAELVQLEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSKSWHDM 90
Query: 101 QVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGD--- 157
Q ++A YKKT ETLS AGQK +AA S VG+AIS+K GD
Sbjct: 91 QTTTA--------------------YKKTHETLSHAGQKATAAFSNVGTAISKKFGDMSY 130
Query: 158 ----------MRNSATFKSFEDRVGT----IKSKVVGDRENG 185
MRNS TFKSFE+RV T +K+KV G NG
Sbjct: 131 SIRHSISMPAMRNSPTFKSFEERVETTVTSLKTKVGGTNPNG 172
>gi|49574214 protein kinase NYD-SP25 isoform 1 [Homo sapiens]
Length = 140
Score = 139 bits (351), Expect = 1e-33
Identities = 82/160 (51%), Positives = 101/160 (63%), Gaps = 29/160 (18%)
Query: 23 TDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLG 82
T+ V T + T +E LTE E+ EL+ +LTK+E EIVTLR VLAAKER CGELKR+LG
Sbjct: 6 TETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLG 65
Query: 83 LSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSA 142
L+ L L+QNLS+SW DVQVS+ YVK QKTSA
Sbjct: 66 LTALVGLRQNLSKSWLDVQVSNTYVK-----------------------------QKTSA 96
Query: 143 ALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVGDR 182
ALST+G+ I RKLG ++ SAT +SFE +GTIKSKV G +
Sbjct: 97 ALSTMGTLICRKLGGVKKSATLRSFEGLMGTIKSKVSGGK 136
>gi|49574216 protein kinase NYD-SP25 isoform 3 [Homo sapiens]
Length = 132
Score = 125 bits (315), Expect = 2e-29
Identities = 74/146 (50%), Positives = 91/146 (62%), Gaps = 29/146 (19%)
Query: 23 TDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLG 82
T+ V T + T +E LTE E+ EL+ +LTK+E EIVTLR VLAAKER CGELKR+LG
Sbjct: 6 TETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLG 65
Query: 83 LSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSA 142
L+ L L+QNLS+SW DVQVS+ YVK QKTSA
Sbjct: 66 LTALVGLRQNLSKSWLDVQVSNTYVK-----------------------------QKTSA 96
Query: 143 ALSTVGSAISRKLGDMRNSATFKSFE 168
ALST+G+ I RKLG ++ SAT +SFE
Sbjct: 97 ALSTMGTLICRKLGGVKKSATLRSFE 122
>gi|49574212 protein kinase NYD-SP25 isoform 2 [Homo sapiens]
Length = 136
Score = 125 bits (315), Expect = 2e-29
Identities = 74/146 (50%), Positives = 91/146 (62%), Gaps = 29/146 (19%)
Query: 23 TDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLG 82
T+ V T + T +E LTE E+ EL+ +LTK+E EIVTLR VLAAKER CGELKR+LG
Sbjct: 6 TETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLG 65
Query: 83 LSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSA 142
L+ L L+QNLS+SW DVQVS+ YVK QKTSA
Sbjct: 66 LTALVGLRQNLSKSWLDVQVSNTYVK-----------------------------QKTSA 96
Query: 143 ALSTVGSAISRKLGDMRNSATFKSFE 168
ALST+G+ I RKLG ++ SAT +SFE
Sbjct: 97 ALSTMGTLICRKLGGVKKSATLRSFE 122
>gi|51173748 tumor protein D52-like 1 isoform 4 [Homo sapiens]
Length = 131
Score = 123 bits (308), Expect = 1e-28
Identities = 64/119 (53%), Positives = 84/119 (70%), Gaps = 20/119 (16%)
Query: 41 LTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDV 100
L+E E+EEL+AEL ++E+EI TLRQVL+AKERH E+K++LG++ + ELKQN S+SWHD+
Sbjct: 31 LSEEEKEELKAELVQLEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSKSWHDM 90
Query: 101 QVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMR 159
Q ++A YKKT ETLS AGQK +AA S VG+AIS+K GDMR
Sbjct: 91 QTTTA--------------------YKKTHETLSHAGQKATAAFSNVGTAISKKFGDMR 129
>gi|51173746 tumor protein D52-like 1 isoform 3 [Homo sapiens]
Length = 144
Score = 121 bits (304), Expect = 4e-28
Identities = 64/121 (52%), Positives = 84/121 (69%), Gaps = 20/121 (16%)
Query: 41 LTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDV 100
L+E E+EEL+AEL ++E+EI TLRQVL+AKERH E+K++LG++ + ELKQN S+SWHD+
Sbjct: 31 LSEEEKEELKAELVQLEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSKSWHDM 90
Query: 101 QVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRN 160
Q ++A YKKT ETLS AGQK +AA S VG+AIS+K GDM
Sbjct: 91 QTTTA--------------------YKKTHETLSHAGQKATAAFSNVGTAISKKFGDMSY 130
Query: 161 S 161
S
Sbjct: 131 S 131
>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
sapiens]
Length = 1937
Score = 37.7 bits (86), Expect = 0.007
Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 33/197 (16%)
Query: 37 AVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRL----------GLSTL 86
AVE + + +EL+A + ++ EEI R A E+ +L R L G +T
Sbjct: 1102 AVEIQLQKKIKELQARIEELGEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGGATS 1161
Query: 87 GELKQNLSRS---------------WHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQE 131
+++ N R H+ V++ K ++ + E E++ K+ E
Sbjct: 1162 AQVELNKKREAEFQKLRRDLEEATLQHEAMVAALRKKHADSMAELGEQIDNLQRVKQKLE 1221
Query: 132 TLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSK------VVGDRENG 185
+ + LS+ AIS+ G++ +S ED+V +K+K ++ D
Sbjct: 1222 KEKSELKMETDDLSSNAEAISKAKGNLEKMC--RSLEDQVSELKTKEEEQQRLINDLTAQ 1279
Query: 186 SDNLPSSAGSGDKPLSD 202
L + AG + L +
Sbjct: 1280 RARLQTEAGEYSRQLDE 1296
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 36.6 bits (83), Expect = 0.015
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 29 TGVAARTPAVEGLTEAEE---EELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLST 85
T +AA T ++ L + + +E + K + I + + + KE +C LK +L +
Sbjct: 2185 TQLAAFTKSMSSLQDDRDRVIDEAKKWERKFSDAIQSKEEEIRLKEDNCSVLKDQLRQMS 2244
Query: 86 LG--ELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQS------DLYKKTQET--LSQ 135
+ ELK N+SR HD Q+ + +T +L +KV + +L + +ET L
Sbjct: 2245 IHMEELKINISRLEHDKQIWESKAQTEVQL---QQKVCDTLQGENKELLSQLEETRHLYH 2301
Query: 136 AGQKTSAALSTVGSAISRKLGDMRNS 161
+ Q A L + ++ +L D+ NS
Sbjct: 2302 SSQNELAKLESELKSLKDQLTDLSNS 2327
>gi|205277396 dynactin 1 isoform 4 [Homo sapiens]
Length = 1139
Score = 36.2 bits (82), Expect = 0.020
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 39/144 (27%)
Query: 12 SPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEA-----------EEEELRAELTKVEEEI 60
S + G LS S P T +AA LT EEE LRA++ +EE++
Sbjct: 38 SASAGELSSSEPSTPAQTPLAAPIIPTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLEEKL 97
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
TLR LKR + L EL++ H +Q+ E++ EW K+
Sbjct: 98 ETLR------------LKRAEDKAKLKELEK------HKIQL--------EQVQEWKSKM 131
Query: 121 --TQSDLYKKTQETLSQAGQKTSA 142
Q+DL ++ +E +A + A
Sbjct: 132 QEQQADLQRRLKEARKEAKEALEA 155
>gi|205277392 dynactin 1 isoform 3 [Homo sapiens]
Length = 1253
Score = 36.2 bits (82), Expect = 0.020
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 39/144 (27%)
Query: 12 SPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEA-----------EEEELRAELTKVEEEI 60
S + G LS S P T +AA LT EEE LRA++ +EE++
Sbjct: 152 SASAGELSSSEPSTPAQTPLAAPIIPTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLEEKL 211
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
TLR LKR + L EL++ H +Q+ E++ EW K+
Sbjct: 212 ETLR------------LKRAEDKAKLKELEK------HKIQL--------EQVQEWKSKM 245
Query: 121 --TQSDLYKKTQETLSQAGQKTSA 142
Q+DL ++ +E +A + A
Sbjct: 246 QEQQADLQRRLKEARKEAKEALEA 269
>gi|13259508 dynactin 1 isoform 2 [Homo sapiens]
Length = 1144
Score = 36.2 bits (82), Expect = 0.020
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 39/144 (27%)
Query: 12 SPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEA-----------EEEELRAELTKVEEEI 60
S + G LS S P T +AA LT EEE LRA++ +EE++
Sbjct: 38 SASAGELSSSEPSTPAQTPLAAPIIPTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLEEKL 97
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
TLR LKR + L EL++ H +Q+ E++ EW K+
Sbjct: 98 ETLR------------LKRAEDKAKLKELEK------HKIQL--------EQVQEWKSKM 131
Query: 121 --TQSDLYKKTQETLSQAGQKTSA 142
Q+DL ++ +E +A + A
Sbjct: 132 QEQQADLQRRLKEARKEAKEALEA 155
>gi|13259510 dynactin 1 isoform 1 [Homo sapiens]
Length = 1278
Score = 36.2 bits (82), Expect = 0.020
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 39/144 (27%)
Query: 12 SPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEA-----------EEEELRAELTKVEEEI 60
S + G LS S P T +AA LT EEE LRA++ +EE++
Sbjct: 172 SASAGELSSSEPSTPAQTPLAAPIIPTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLEEKL 231
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
TLR LKR + L EL++ H +Q+ E++ EW K+
Sbjct: 232 ETLR------------LKRAEDKAKLKELEK------HKIQL--------EQVQEWKSKM 265
Query: 121 --TQSDLYKKTQETLSQAGQKTSA 142
Q+DL ++ +E +A + A
Sbjct: 266 QEQQADLQRRLKEARKEAKEALEA 289
>gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo
sapiens]
Length = 1116
Score = 33.5 bits (75), Expect = 0.13
Identities = 31/151 (20%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Query: 28 DTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLG 87
D+ P V LTE + L AE + +E+ LR+ L EL+ TL
Sbjct: 249 DSSSRTGEPCVAELTEENFQRLHAEHERQAKELFLLRKTLEEM-----ELRIETQKQTLN 303
Query: 88 ELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTV 147
+++ + +Q K +E+ E ++ +++++ E+L + +K ++ L
Sbjct: 304 ARDESIKKLLEMLQSKGLSAKATEEDHERTRRLAEAEMHVHHLESLLEQKEKENSMLR-- 361
Query: 148 GSAISRKLGDMRNSATFKSFEDRVGTIKSKV 178
+ R+ + +SA K+ + + SK+
Sbjct: 362 -EEMHRRFENAPDSAKTKALQTVIEMKDSKI 391
>gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens]
Length = 1088
Score = 33.5 bits (75), Expect = 0.13
Identities = 31/151 (20%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Query: 28 DTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLG 87
D+ P V LTE + L AE + +E+ LR+ L EL+ TL
Sbjct: 249 DSSSRTGEPCVAELTEENFQRLHAEHERQAKELFLLRKTLEEM-----ELRIETQKQTLN 303
Query: 88 ELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTV 147
+++ + +Q K +E+ E ++ +++++ E+L + +K ++ L
Sbjct: 304 ARDESIKKLLEMLQSKGLSAKATEEDHERTRRLAEAEMHVHHLESLLEQKEKENSMLR-- 361
Query: 148 GSAISRKLGDMRNSATFKSFEDRVGTIKSKV 178
+ R+ + +SA K+ + + SK+
Sbjct: 362 -EEMHRRFENAPDSAKTKALQTVIEMKDSKI 391
>gi|56550047 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 2 [Homo sapiens]
Length = 1403
Score = 32.7 bits (73), Expect = 0.22
Identities = 40/151 (26%), Positives = 63/151 (41%), Gaps = 27/151 (17%)
Query: 48 ELRAELTKVEEEIVTLRQVLAAKER------HCGELK----------RRLGLSTLGELKQ 91
E+ A K +EEIVTL + A+++ C ++K R +T ELK
Sbjct: 935 EILANYRKGQEEIVTLHAEIKAQKKELDTIQECIKVKYAPIVSFEECERKFKATEKELKD 994
Query: 92 NLSRSWHDVQVSSAYVKTSEKLGEWNEK---VTQSDLYKKTQETLSQAGQKTSAALSTVG 148
LS VS VK +++ + +K Q DL KT L + + ALS
Sbjct: 995 QLSEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQKDLRDKT--VLIEKSHEMERALSRKT 1052
Query: 149 SAISRKLGDMRNSATFKSFEDRVGTIKSKVV 179
++++L D+ T V +K K+V
Sbjct: 1053 DELNKQLKDLSQKYT------EVKNVKEKLV 1077
>gi|59850762 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 1 [Homo sapiens]
Length = 1416
Score = 32.7 bits (73), Expect = 0.22
Identities = 40/151 (26%), Positives = 63/151 (41%), Gaps = 27/151 (17%)
Query: 48 ELRAELTKVEEEIVTLRQVLAAKER------HCGELK----------RRLGLSTLGELKQ 91
E+ A K +EEIVTL + A+++ C ++K R +T ELK
Sbjct: 948 EILANYRKGQEEIVTLHAEIKAQKKELDTIQECIKVKYAPIVSFEECERKFKATEKELKD 1007
Query: 92 NLSRSWHDVQVSSAYVKTSEKLGEWNEK---VTQSDLYKKTQETLSQAGQKTSAALSTVG 148
LS VS VK +++ + +K Q DL KT L + + ALS
Sbjct: 1008 QLSEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQKDLRDKT--VLIEKSHEMERALSRKT 1065
Query: 149 SAISRKLGDMRNSATFKSFEDRVGTIKSKVV 179
++++L D+ T V +K K+V
Sbjct: 1066 DELNKQLKDLSQKYT------EVKNVKEKLV 1090
>gi|55770878 neuronal pentraxin I precursor [Homo sapiens]
Length = 432
Score = 32.3 bits (72), Expect = 0.29
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 23 TDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLG 82
T VPVD + A + A G EELR+ + ++ E ++ ++ + +++ EL +LG
Sbjct: 33 TSVPVDADMCAASVAAGGA-----EELRSSVLQLRETVLQQKETILSQKETIRELTAKLG 87
Query: 83 LSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYK-KTQETLSQAGQ 138
S+S D A K + K T DL + ETLSQ GQ
Sbjct: 88 RCE--------SQSTLDPGAGEARAGGGRK-QPGSGKNTMGDLSRTPAAETLSQLGQ 135
>gi|30089940 Golgi autoantigen, golgin subfamily a, 3 [Homo sapiens]
Length = 1498
Score = 32.3 bits (72), Expect = 0.29
Identities = 36/165 (21%), Positives = 72/165 (43%), Gaps = 26/165 (15%)
Query: 45 EEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSS 104
E+ AEL+++ E+ +RQ +A E H ++ E++ +L D +
Sbjct: 893 EKRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKE-----RDEMETHLQSLQFDKEQMV 947
Query: 105 AYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATF 164
A + +E L K +L ++ ++ +++ QK + +GS ++ +M+
Sbjct: 948 AVTEANEAL-----KKQIEELQQEARKAITEQKQK----MRRLGSDLTSAQKEMKTK--H 996
Query: 165 KSFEDRVG--------TIKSKVVGDRENGSDNLPSSAGSGDKPLS 201
K++E+ VG + +K D E G L + GS D L+
Sbjct: 997 KAYENAVGILSRRLQEALAAKEAADAELG--QLRAQGGSSDSSLA 1039
>gi|145312241 differentially expressed in FDCP 6 homolog [Homo
sapiens]
Length = 631
Score = 31.6 bits (70), Expect = 0.50
Identities = 31/164 (18%), Positives = 69/164 (42%), Gaps = 15/164 (9%)
Query: 46 EEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSA 105
+EE + + ++E L+Q +A + R + +++L E++QN R+ DV+ +
Sbjct: 477 KEEQERYIERAQQEKEELQQEMAQQSRSLQQAQQQLE-----EVRQNRQRADEDVEAAQR 531
Query: 106 YVK-TSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTVG---SAISRKLGDMRNS 161
++ S + WN ++ + + ++ + S G ++ + ++
Sbjct: 532 KLRQASTNVKHWNVQMN------RLMHPIEPGDKRPVTSSSFSGFQPPLLAHRDSSLKRL 585
Query: 162 ATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAP 205
+ S +R + S NG D P+ A + + DPAP
Sbjct: 586 TRWGSQGNRTPSPNSNEQQKSLNGGDEAPAPASTPQEDKLDPAP 629
>gi|33188435 deleted in liver cancer 1 isoform 3 [Homo sapiens]
Length = 498
Score = 31.6 bits (70), Expect = 0.50
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 2 DSAGQDINLNSPNKGLLSDS-MTDVPVDTGVA-----ARTPAVEGLTEAEEEELRAELTK 55
+S I++N L SD+ TD+P T VA +T A++G++E E+ +++ +
Sbjct: 398 ESGADTISVNQTRVNLSSDTESTDLPSSTPVANSGTKPKTTAIQGISEKEKAAVKSVKLE 457
Query: 56 VEEE 59
V+E+
Sbjct: 458 VDED 461
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.306 0.124 0.333
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,080,495
Number of Sequences: 37866
Number of extensions: 282545
Number of successful extensions: 1289
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 103
Number of HSP's that attempted gapping in prelim test: 1190
Number of HSP's gapped (non-prelim): 194
length of query: 206
length of database: 18,247,518
effective HSP length: 97
effective length of query: 109
effective length of database: 14,574,516
effective search space: 1588622244
effective search space used: 1588622244
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.