Search of human proteins with 38146111

Search of human proteins with 38146111

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|38146111 DALR anticodon binding domain containing 3 isoform
2 [Homo sapiens]
         (376 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|38146111 DALR anticodon binding domain containing 3 isoform 2...   763   0.0  
gi|58331230 DALR anticodon binding domain containing 3 isoform 1...   763   0.0  
gi|197100773 arginyl-tRNA synthetase 2, mitochondrial precursor ...    33   0.32 

>gi|38146111 DALR anticodon binding domain containing 3 isoform 2
           [Homo sapiens]
          Length = 376

 Score =  763 bits (1969), Expect = 0.0
 Identities = 376/376 (100%), Positives = 376/376 (100%)

Query: 1   MLTFLQQLRVDWPAASERASSHTLRSHALEELTSANDGRTLSPGILGRLCLKELVEEQGR 60
           MLTFLQQLRVDWPAASERASSHTLRSHALEELTSANDGRTLSPGILGRLCLKELVEEQGR
Sbjct: 1   MLTFLQQLRVDWPAASERASSHTLRSHALEELTSANDGRTLSPGILGRLCLKELVEEQGR 60

Query: 61  TAGYDPNLDNCLVTEDLLSVLAELQEALWHWPEDSHPGLAGASDTGTGGCLVVHVVSCEE 120
           TAGYDPNLDNCLVTEDLLSVLAELQEALWHWPEDSHPGLAGASDTGTGGCLVVHVVSCEE
Sbjct: 61  TAGYDPNLDNCLVTEDLLSVLAELQEALWHWPEDSHPGLAGASDTGTGGCLVVHVVSCEE 120

Query: 121 EFQQQKLDLLWQKLVDKAPLRQKHLICGPVKVAGAPGTLMTAPEYYEFRHTQVCKASALK 180
           EFQQQKLDLLWQKLVDKAPLRQKHLICGPVKVAGAPGTLMTAPEYYEFRHTQVCKASALK
Sbjct: 121 EFQQQKLDLLWQKLVDKAPLRQKHLICGPVKVAGAPGTLMTAPEYYEFRHTQVCKASALK 180

Query: 181 HGGDLAQDPAWTEIFGVLSVATIKFEMLSTAPQSQLFLALADSSISTKGTKSGTFVMYNC 240
           HGGDLAQDPAWTEIFGVLSVATIKFEMLSTAPQSQLFLALADSSISTKGTKSGTFVMYNC
Sbjct: 181 HGGDLAQDPAWTEIFGVLSVATIKFEMLSTAPQSQLFLALADSSISTKGTKSGTFVMYNC 240

Query: 241 ARLATLFESYKCSMEQGLYPTFPPVSSLDFSLLHDEGEWLLLFNSILPFPDLLSRTAVLD 300
           ARLATLFESYKCSMEQGLYPTFPPVSSLDFSLLHDEGEWLLLFNSILPFPDLLSRTAVLD
Sbjct: 241 ARLATLFESYKCSMEQGLYPTFPPVSSLDFSLLHDEGEWLLLFNSILPFPDLLSRTAVLD 300

Query: 301 CTAPGLHIAVRTEMICKFLVQLSMDFSSYYNRVHILGEPRPHLFGQMFVRLQLLRAVREV 360
           CTAPGLHIAVRTEMICKFLVQLSMDFSSYYNRVHILGEPRPHLFGQMFVRLQLLRAVREV
Sbjct: 301 CTAPGLHIAVRTEMICKFLVQLSMDFSSYYNRVHILGEPRPHLFGQMFVRLQLLRAVREV 360

Query: 361 LHTGLAMLGLPPLSHI 376
           LHTGLAMLGLPPLSHI
Sbjct: 361 LHTGLAMLGLPPLSHI 376


>gi|58331230 DALR anticodon binding domain containing 3 isoform 1
           [Homo sapiens]
          Length = 543

 Score =  763 bits (1969), Expect = 0.0
 Identities = 376/376 (100%), Positives = 376/376 (100%)

Query: 1   MLTFLQQLRVDWPAASERASSHTLRSHALEELTSANDGRTLSPGILGRLCLKELVEEQGR 60
           MLTFLQQLRVDWPAASERASSHTLRSHALEELTSANDGRTLSPGILGRLCLKELVEEQGR
Sbjct: 168 MLTFLQQLRVDWPAASERASSHTLRSHALEELTSANDGRTLSPGILGRLCLKELVEEQGR 227

Query: 61  TAGYDPNLDNCLVTEDLLSVLAELQEALWHWPEDSHPGLAGASDTGTGGCLVVHVVSCEE 120
           TAGYDPNLDNCLVTEDLLSVLAELQEALWHWPEDSHPGLAGASDTGTGGCLVVHVVSCEE
Sbjct: 228 TAGYDPNLDNCLVTEDLLSVLAELQEALWHWPEDSHPGLAGASDTGTGGCLVVHVVSCEE 287

Query: 121 EFQQQKLDLLWQKLVDKAPLRQKHLICGPVKVAGAPGTLMTAPEYYEFRHTQVCKASALK 180
           EFQQQKLDLLWQKLVDKAPLRQKHLICGPVKVAGAPGTLMTAPEYYEFRHTQVCKASALK
Sbjct: 288 EFQQQKLDLLWQKLVDKAPLRQKHLICGPVKVAGAPGTLMTAPEYYEFRHTQVCKASALK 347

Query: 181 HGGDLAQDPAWTEIFGVLSVATIKFEMLSTAPQSQLFLALADSSISTKGTKSGTFVMYNC 240
           HGGDLAQDPAWTEIFGVLSVATIKFEMLSTAPQSQLFLALADSSISTKGTKSGTFVMYNC
Sbjct: 348 HGGDLAQDPAWTEIFGVLSVATIKFEMLSTAPQSQLFLALADSSISTKGTKSGTFVMYNC 407

Query: 241 ARLATLFESYKCSMEQGLYPTFPPVSSLDFSLLHDEGEWLLLFNSILPFPDLLSRTAVLD 300
           ARLATLFESYKCSMEQGLYPTFPPVSSLDFSLLHDEGEWLLLFNSILPFPDLLSRTAVLD
Sbjct: 408 ARLATLFESYKCSMEQGLYPTFPPVSSLDFSLLHDEGEWLLLFNSILPFPDLLSRTAVLD 467

Query: 301 CTAPGLHIAVRTEMICKFLVQLSMDFSSYYNRVHILGEPRPHLFGQMFVRLQLLRAVREV 360
           CTAPGLHIAVRTEMICKFLVQLSMDFSSYYNRVHILGEPRPHLFGQMFVRLQLLRAVREV
Sbjct: 468 CTAPGLHIAVRTEMICKFLVQLSMDFSSYYNRVHILGEPRPHLFGQMFVRLQLLRAVREV 527

Query: 361 LHTGLAMLGLPPLSHI 376
           LHTGLAMLGLPPLSHI
Sbjct: 528 LHTGLAMLGLPPLSHI 543


>gi|197100773 arginyl-tRNA synthetase 2, mitochondrial precursor
           [Homo sapiens]
          Length = 578

 Score = 33.5 bits (75), Expect = 0.32
 Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 25/142 (17%)

Query: 232 SGTFVMYNCARLATLFESYKCSMEQGLYPTFPPVSSLDFSLLHDEGEWLLLFNSILPFPD 291
           +G F+ Y  ARL +L E++ C            ++  + + L  E + + +   +L F +
Sbjct: 459 TGVFLQYTHARLHSLEETFGCGY----------LNDFNTACLQ-EPQSVSILQHLLRFDE 507

Query: 292 LLSRTAVLDCTAPGLHIAVRTEMICKFLVQLSMDFSSYYNRVHILGEPRPHLFGQMFVRL 351
           +L +++             +   I  +L+ LS   +  +  + I   P P + G    RL
Sbjct: 508 VLYKSSQ----------DFQPRHIVSYLLTLSHLAAVAHKTLQIKDSP-PEVAG---ARL 553

Query: 352 QLLRAVREVLHTGLAMLGLPPL 373
            L +AVR VL  G+ +LG+ P+
Sbjct: 554 HLFKAVRSVLANGMKLLGITPV 575


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.136    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,292,460
Number of Sequences: 37866
Number of extensions: 696261
Number of successful extensions: 1233
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1230
Number of HSP's gapped (non-prelim): 3
length of query: 376
length of database: 18,247,518
effective HSP length: 104
effective length of query: 272
effective length of database: 14,309,454
effective search space: 3892171488
effective search space used: 3892171488
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.