BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|122937476 lipase, family member K [Homo sapiens] (399 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|122937476 lipase, family member K [Homo sapiens] 834 0.0 gi|4758676 lipase, gastric precursor [Homo sapiens] 542 e-154 gi|51317399 lipase A precursor [Homo sapiens] 467 e-132 gi|189083851 lipase A precursor [Homo sapiens] 467 e-132 gi|231563300 lipase, family member J [Homo sapiens] 466 e-131 gi|189571695 lipase, family member M [Homo sapiens] 442 e-124 gi|156447044 lipase-like, ab-hydrolase domain containing 4 [Homo... 428 e-120 gi|23200008 abhydrolase domain containing 11 isoform 1 [Homo sap... 31 1.7 gi|23200012 abhydrolase domain containing 11 isoform 2 [Homo sap... 31 1.7 gi|56606135 hypothetical protein LOC136242 [Homo sapiens] 30 5.0 gi|115334677 retinoblastoma-binding protein 1 isoform I [Homo sa... 30 5.0 gi|187960079 MAD2 homolog [Homo sapiens] 30 5.0 gi|187960073 MAD2 homolog [Homo sapiens] 30 5.0 >gi|122937476 lipase, family member K [Homo sapiens] Length = 399 Score = 834 bits (2155), Expect = 0.0 Identities = 399/399 (100%), Positives = 399/399 (100%) Query: 1 MWQLLAAACWMLLLGSMYGYDKKGNNANPEANMNISQIISYWGYPYEEYDVTTKDGYILG 60 MWQLLAAACWMLLLGSMYGYDKKGNNANPEANMNISQIISYWGYPYEEYDVTTKDGYILG Sbjct: 1 MWQLLAAACWMLLLGSMYGYDKKGNNANPEANMNISQIISYWGYPYEEYDVTTKDGYILG 60 Query: 61 IYRIPHGRGCPGRTAPKPAVYLQHGLIASASNWICNLPNNSLAFLLADSGYDVWLGNSRG 120 IYRIPHGRGCPGRTAPKPAVYLQHGLIASASNWICNLPNNSLAFLLADSGYDVWLGNSRG Sbjct: 61 IYRIPHGRGCPGRTAPKPAVYLQHGLIASASNWICNLPNNSLAFLLADSGYDVWLGNSRG 120 Query: 121 NTWSRKHLKLSPKSPEYWAFSLDEMAKYDLPATINFIIEKTGQKRLYYVGHSQGTTIAFI 180 NTWSRKHLKLSPKSPEYWAFSLDEMAKYDLPATINFIIEKTGQKRLYYVGHSQGTTIAFI Sbjct: 121 NTWSRKHLKLSPKSPEYWAFSLDEMAKYDLPATINFIIEKTGQKRLYYVGHSQGTTIAFI 180 Query: 181 AFSTNPELAKKIKIFFALAPVVTVKYTQSPMKKLTTLSRRVVKVLFGDKMFHPHTLFDQF 240 AFSTNPELAKKIKIFFALAPVVTVKYTQSPMKKLTTLSRRVVKVLFGDKMFHPHTLFDQF Sbjct: 181 AFSTNPELAKKIKIFFALAPVVTVKYTQSPMKKLTTLSRRVVKVLFGDKMFHPHTLFDQF 240 Query: 241 IATKVCNRKLFRRICSNFLFTLSGFDPQNLNMSRLDVYLSHNPAGTSVQNMLHWAQAVNS 300 IATKVCNRKLFRRICSNFLFTLSGFDPQNLNMSRLDVYLSHNPAGTSVQNMLHWAQAVNS Sbjct: 241 IATKVCNRKLFRRICSNFLFTLSGFDPQNLNMSRLDVYLSHNPAGTSVQNMLHWAQAVNS 300 Query: 301 GQLQAFDWGNSDQNMMHFHQLTPPLYNITKMEVPTAIWNGGQDIVADPKDVENLLPQIAN 360 GQLQAFDWGNSDQNMMHFHQLTPPLYNITKMEVPTAIWNGGQDIVADPKDVENLLPQIAN Sbjct: 301 GQLQAFDWGNSDQNMMHFHQLTPPLYNITKMEVPTAIWNGGQDIVADPKDVENLLPQIAN 360 Query: 361 LIYYKLIPHYNHVDFYLGEDAPQEIYQDLIILMEEYLQN 399 LIYYKLIPHYNHVDFYLGEDAPQEIYQDLIILMEEYLQN Sbjct: 361 LIYYKLIPHYNHVDFYLGEDAPQEIYQDLIILMEEYLQN 399 >gi|4758676 lipase, gastric precursor [Homo sapiens] Length = 398 Score = 542 bits (1396), Expect = e-154 Identities = 249/395 (63%), Positives = 314/395 (79%) Query: 1 MWQLLAAACWMLLLGSMYGYDKKGNNANPEANMNISQIISYWGYPYEEYDVTTKDGYILG 60 MW LL A + +LG+ +G K + +PE MNISQ+I+YWGYP EEY+V T+DGYIL Sbjct: 1 MWLLLTMASLISVLGTTHGLFGKLHPGSPEVTMNISQMITYWGYPNEEYEVVTEDGYILE 60 Query: 61 IYRIPHGRGCPGRTAPKPAVYLQHGLIASASNWICNLPNNSLAFLLADSGYDVWLGNSRG 120 + RIP+G+ G T +P V+LQHGL+ASA+NWI NLPNNSLAF+LAD+GYDVWLGNSRG Sbjct: 61 VNRIPYGKKNSGNTGQRPVVFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRG 120 Query: 121 NTWSRKHLKLSPKSPEYWAFSLDEMAKYDLPATINFIIEKTGQKRLYYVGHSQGTTIAFI 180 NTW+R++L SP S E+WAFS DEMAKYDLPATI+FI++KTGQK+L+YVGHSQGTTI FI Sbjct: 121 NTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFIVKKTGQKQLHYVGHSQGTTIGFI 180 Query: 181 AFSTNPELAKKIKIFFALAPVVTVKYTQSPMKKLTTLSRRVVKVLFGDKMFHPHTLFDQF 240 AFSTNP LAK+IK F+ALAPV TVKYT+S + KL + + + K +FGDK+F+PH FDQF Sbjct: 181 AFSTNPSLAKRIKTFYALAPVATVKYTKSLINKLRFVPQSLFKFIFGDKIFYPHNFFDQF 240 Query: 241 IATKVCNRKLFRRICSNFLFTLSGFDPQNLNMSRLDVYLSHNPAGTSVQNMLHWAQAVNS 300 +AT+VC+R++ +CSN LF + GFD +N N SRLDVYLSHNPAGTSVQNM HW QAV S Sbjct: 241 LATEVCSREMLNLLCSNALFIICGFDSKNFNTSRLDVYLSHNPAGTSVQNMFHWTQAVKS 300 Query: 301 GQLQAFDWGNSDQNMMHFHQLTPPLYNITKMEVPTAIWNGGQDIVADPKDVENLLPQIAN 360 G+ QA+DWG+ QN MH+ Q PP YN+T M VP A+WNGG+D++ADP+DV LLP++ N Sbjct: 301 GKFQAYDWGSPVQNRMHYDQSQPPYYNVTAMNVPIAVWNGGKDLLADPQDVGLLLPKLPN 360 Query: 361 LIYYKLIPHYNHVDFYLGEDAPQEIYQDLIILMEE 395 LIY+K IP YNH+DF DAPQE+Y D++ ++ E Sbjct: 361 LIYHKEIPFYNHLDFIWAMDAPQEVYNDIVSMISE 395 >gi|51317399 lipase A precursor [Homo sapiens] Length = 399 Score = 467 bits (1201), Expect = e-132 Identities = 222/388 (57%), Positives = 281/388 (72%) Query: 9 CWMLLLGSMYGYDKKGNNANPEANMNISQIISYWGYPYEEYDVTTKDGYILGIYRIPHGR 68 C +L G K +PE NMN+S+IISYWG+P EEY V T+DGYIL + RIPHGR Sbjct: 11 CLVLWTLHSEGSGGKLTAVDPETNMNVSEIISYWGFPSEEYLVETEDGYILCLNRIPHGR 70 Query: 69 GCPGRTAPKPAVYLQHGLIASASNWICNLPNNSLAFLLADSGYDVWLGNSRGNTWSRKHL 128 PKP V+LQHGL+A +SNW+ NL N+SL F+LAD+G+DVW+GNSRGNTWSRKH Sbjct: 71 KNHSDKGPKPVVFLQHGLLADSSNWVTNLANSSLGFILADAGFDVWMGNSRGNTWSRKHK 130 Query: 129 KLSPKSPEYWAFSLDEMAKYDLPATINFIIEKTGQKRLYYVGHSQGTTIAFIAFSTNPEL 188 LS E+WAFS DEMAKYDLPA+INFI+ KTGQ+++YYVGHSQGTTI FIAFS PEL Sbjct: 131 TLSVSQDEFWAFSYDEMAKYDLPASINFILNKTGQEQVYYVGHSQGTTIGFIAFSQIPEL 190 Query: 189 AKKIKIFFALAPVVTVKYTQSPMKKLTTLSRRVVKVLFGDKMFHPHTLFDQFIATKVCNR 248 AK+IK+FFAL PV +V + SPM KL L ++K LFGDK F P + F +++ T VC Sbjct: 191 AKRIKMFFALGPVASVAFCTSPMAKLGRLPDHLIKDLFGDKEFLPQSAFLKWLGTHVCTH 250 Query: 249 KLFRRICSNFLFTLSGFDPQNLNMSRLDVYLSHNPAGTSVQNMLHWAQAVNSGQLQAFDW 308 + + +C N F L GF+ +NLNMSR+DVY +H+PAGTSVQNMLHW+QAV + QAFDW Sbjct: 251 VILKELCGNLCFLLCGFNERNLNMSRVDVYTTHSPAGTSVQNMLHWSQAVKFQKFQAFDW 310 Query: 309 GNSDQNMMHFHQLTPPLYNITKMEVPTAIWNGGQDIVADPKDVENLLPQIANLIYYKLIP 368 G+S +N H++Q PP YN+ M VPTA+W+GG D +AD DV LL QI NL++++ IP Sbjct: 311 GSSAKNYFHYNQSYPPTYNVKDMLVPTAVWSGGHDWLADVYDVNILLTQITNLVFHESIP 370 Query: 369 HYNHVDFYLGEDAPQEIYQDLIILMEEY 396 + H+DF G DAP +Y +I LM +Y Sbjct: 371 EWEHLDFIWGLDAPWRLYNKIINLMRKY 398 >gi|189083851 lipase A precursor [Homo sapiens] Length = 399 Score = 467 bits (1201), Expect = e-132 Identities = 222/388 (57%), Positives = 281/388 (72%) Query: 9 CWMLLLGSMYGYDKKGNNANPEANMNISQIISYWGYPYEEYDVTTKDGYILGIYRIPHGR 68 C +L G K +PE NMN+S+IISYWG+P EEY V T+DGYIL + RIPHGR Sbjct: 11 CLVLWTLHSEGSGGKLTAVDPETNMNVSEIISYWGFPSEEYLVETEDGYILCLNRIPHGR 70 Query: 69 GCPGRTAPKPAVYLQHGLIASASNWICNLPNNSLAFLLADSGYDVWLGNSRGNTWSRKHL 128 PKP V+LQHGL+A +SNW+ NL N+SL F+LAD+G+DVW+GNSRGNTWSRKH Sbjct: 71 KNHSDKGPKPVVFLQHGLLADSSNWVTNLANSSLGFILADAGFDVWMGNSRGNTWSRKHK 130 Query: 129 KLSPKSPEYWAFSLDEMAKYDLPATINFIIEKTGQKRLYYVGHSQGTTIAFIAFSTNPEL 188 LS E+WAFS DEMAKYDLPA+INFI+ KTGQ+++YYVGHSQGTTI FIAFS PEL Sbjct: 131 TLSVSQDEFWAFSYDEMAKYDLPASINFILNKTGQEQVYYVGHSQGTTIGFIAFSQIPEL 190 Query: 189 AKKIKIFFALAPVVTVKYTQSPMKKLTTLSRRVVKVLFGDKMFHPHTLFDQFIATKVCNR 248 AK+IK+FFAL PV +V + SPM KL L ++K LFGDK F P + F +++ T VC Sbjct: 191 AKRIKMFFALGPVASVAFCTSPMAKLGRLPDHLIKDLFGDKEFLPQSAFLKWLGTHVCTH 250 Query: 249 KLFRRICSNFLFTLSGFDPQNLNMSRLDVYLSHNPAGTSVQNMLHWAQAVNSGQLQAFDW 308 + + +C N F L GF+ +NLNMSR+DVY +H+PAGTSVQNMLHW+QAV + QAFDW Sbjct: 251 VILKELCGNLCFLLCGFNERNLNMSRVDVYTTHSPAGTSVQNMLHWSQAVKFQKFQAFDW 310 Query: 309 GNSDQNMMHFHQLTPPLYNITKMEVPTAIWNGGQDIVADPKDVENLLPQIANLIYYKLIP 368 G+S +N H++Q PP YN+ M VPTA+W+GG D +AD DV LL QI NL++++ IP Sbjct: 311 GSSAKNYFHYNQSYPPTYNVKDMLVPTAVWSGGHDWLADVYDVNILLTQITNLVFHESIP 370 Query: 369 HYNHVDFYLGEDAPQEIYQDLIILMEEY 396 + H+DF G DAP +Y +I LM +Y Sbjct: 371 EWEHLDFIWGLDAPWRLYNKIINLMRKY 398 >gi|231563300 lipase, family member J [Homo sapiens] Length = 366 Score = 466 bits (1200), Expect = e-131 Identities = 217/366 (59%), Positives = 282/366 (77%), Gaps = 1/366 (0%) Query: 33 MNISQIISYWGYPYEEYDVTTKDGYILGIYRIPHGRGCPGRT-APKPAVYLQHGLIASAS 91 MNISQIISYWGYP EEYD+ T+DGYILG+YRIP+ R + A + VYLQHGL+ SAS Sbjct: 1 MNISQIISYWGYPDEEYDIVTEDGYILGLYRIPYWRTDNNKNLAQRVVVYLQHGLLTSAS 60 Query: 92 NWICNLPNNSLAFLLADSGYDVWLGNSRGNTWSRKHLKLSPKSPEYWAFSLDEMAKYDLP 151 +WI NLPNNSL F+LAD+GYDVW+GNSRGNTWSRKHL L S E+WAFS DEMAKYDLP Sbjct: 61 SWISNLPNNSLGFILADAGYDVWMGNSRGNTWSRKHLYLETSSKEFWAFSFDEMAKYDLP 120 Query: 152 ATINFIIEKTGQKRLYYVGHSQGTTIAFIAFSTNPELAKKIKIFFALAPVVTVKYTQSPM 211 A+I+F +++T Q+ ++YVGHSQGTTI FI FST ++A++IKIFFALAPV + KY +SP+ Sbjct: 121 ASIDFTVKQTRQEEIFYVGHSQGTTIGFITFSTISKIAERIKIFFALAPVFSTKYLKSPL 180 Query: 212 KKLTTLSRRVVKVLFGDKMFHPHTLFDQFIATKVCNRKLFRRICSNFLFTLSGFDPQNLN 271 ++T + +V G+K F P T F +FI +K+C ++F +IC N LF + G+DP+NLN Sbjct: 181 IRMTYKWKSIVMAFSGNKDFLPKTSFKKFIGSKLCPLQIFDKICLNILFMMFGYDPKNLN 240 Query: 272 MSRLDVYLSHNPAGTSVQNMLHWAQAVNSGQLQAFDWGNSDQNMMHFHQLTPPLYNITKM 331 MSRLDVY SHNPAGTSVQNMLHW+Q +NS L+A+DWG+ D N++H++Q T PLYN+T M Sbjct: 241 MSRLDVYFSHNPAGTSVQNMLHWSQLLNSTHLKAYDWGSPDLNLVHYNQTTSPLYNMTNM 300 Query: 332 EVPTAIWNGGQDIVADPKDVENLLPQIANLIYYKLIPHYNHVDFYLGEDAPQEIYQDLII 391 V TAIWNG D++ADP+DV L +I N IYYK I +YNH+D G D ++Y ++I Sbjct: 301 NVATAIWNGKSDLLADPEDVNILHSEITNHIYYKTISYYNHIDSLFGLDVYDQVYHEIID 360 Query: 392 LMEEYL 397 ++++ L Sbjct: 361 IIQDNL 366 >gi|189571695 lipase, family member M [Homo sapiens] Length = 423 Score = 442 bits (1137), Expect = e-124 Identities = 213/393 (54%), Positives = 284/393 (72%), Gaps = 8/393 (2%) Query: 10 WMLLLGSMYGYDKKGNNAN-------PEANMNISQIISYWGYPYEEYDVTTKDGYILGIY 62 W+L+L + Y + + N+ + PEA MNIS+II + GYP EEY+V T+DGYIL + Sbjct: 18 WLLILVA-YMFQRNVNSVHMPTKAVDPEAFMNISEIIQHQGYPCEEYEVATEDGYILSVN 76 Query: 63 RIPHGRGCPGRTAPKPAVYLQHGLIASASNWICNLPNNSLAFLLADSGYDVWLGNSRGNT 122 RIP G P +T +P V LQHGL+ ASNWI NLPNNSL F+LAD+G+DVW+GNSRGN Sbjct: 77 RIPRGLVQPKKTGSRPVVLLQHGLVGGASNWISNLPNNSLGFILADAGFDVWMGNSRGNA 136 Query: 123 WSRKHLKLSPKSPEYWAFSLDEMAKYDLPATINFIIEKTGQKRLYYVGHSQGTTIAFIAF 182 WSRKH LS E+WAFS DEMA++DLPA INFI++KTGQ+++YYVG+SQGTT+ FIAF Sbjct: 137 WSRKHKTLSIDQDEFWAFSYDEMARFDLPAVINFILQKTGQEKIYYVGYSQGTTMGFIAF 196 Query: 183 STNPELAKKIKIFFALAPVVTVKYTQSPMKKLTTLSRRVVKVLFGDKMFHPHTLFDQFIA 242 ST PELA+KIK++FALAP+ TVK+ +SP K L ++K LFG K F T F + + Sbjct: 197 STMPELAQKIKMYFALAPIATVKHAKSPGTKFLLLPDMMIKGLFGKKEFLYQTRFLRQLV 256 Query: 243 TKVCNRKLFRRICSNFLFTLSGFDPQNLNMSRLDVYLSHNPAGTSVQNMLHWAQAVNSGQ 302 +C + + +ICSN + L GF+ N+NMSR VY +H AGTSVQN+LHW+QAVNSG+ Sbjct: 257 IYLCGQVILDQICSNIMLLLGGFNTNNMNMSRASVYAAHTLAGTSVQNILHWSQAVNSGE 316 Query: 303 LQAFDWGNSDQNMMHFHQLTPPLYNITKMEVPTAIWNGGQDIVADPKDVENLLPQIANLI 362 L+AFDWG+ +N+ +Q TP Y + M VPTA+W GGQD +++P+DV+ LL ++ NLI Sbjct: 317 LRAFDWGSETKNLEKCNQPTPVRYRVRDMTVPTAMWTGGQDWLSNPEDVKMLLSEVTNLI 376 Query: 363 YYKLIPHYNHVDFYLGEDAPQEIYQDLIILMEE 395 Y+K IP + HVDF G DAP +Y ++I LM++ Sbjct: 377 YHKNIPEWAHVDFIWGLDAPHRMYNEIIHLMQQ 409 >gi|156447044 lipase-like, ab-hydrolase domain containing 4 [Homo sapiens] Length = 398 Score = 428 bits (1100), Expect = e-120 Identities = 201/396 (50%), Positives = 269/396 (67%) Query: 1 MWQLLAAACWMLLLGSMYGYDKKGNNANPEANMNISQIISYWGYPYEEYDVTTKDGYILG 60 MW LL C + + G+ N NPE MN S+II Y GYP EEY+VTT+DGYIL Sbjct: 2 MWLLLTTTCLICGTLNAGGFLDLENEVNPEVWMNTSEIIIYNGYPSEEYEVTTEDGYILL 61 Query: 61 IYRIPHGRGCPGRTAPKPAVYLQHGLIASASNWICNLPNNSLAFLLADSGYDVWLGNSRG 120 + RIP+GR T P+P VY+QH L A + W+ N N SL FLLAD+GYDVW+GNSRG Sbjct: 62 VNRIPYGRTHARSTGPRPVVYMQHALFADNAYWLENYANGSLGFLLADAGYDVWMGNSRG 121 Query: 121 NTWSRKHLKLSPKSPEYWAFSLDEMAKYDLPATINFIIEKTGQKRLYYVGHSQGTTIAFI 180 NTWSR+H LS ++WAFS DEMAKYDLP I+FI+ KTGQ++LY++GHS GTTI F+ Sbjct: 122 NTWSRRHKTLSETDEKFWAFSFDEMAKYDLPGVIDFIVNKTGQEKLYFIGHSLGTTIGFV 181 Query: 181 AFSTNPELAKKIKIFFALAPVVTVKYTQSPMKKLTTLSRRVVKVLFGDKMFHPHTLFDQF 240 AFST PELA++IK+ FAL P ++ KY + L ++K +FG K F + Sbjct: 182 AFSTMPELAQRIKMNFALGPTISFKYPTGIFTRFFLLPNSIIKAVFGTKGFFLEDKKTKI 241 Query: 241 IATKVCNRKLFRRICSNFLFTLSGFDPQNLNMSRLDVYLSHNPAGTSVQNMLHWAQAVNS 300 +TK+CN K+ ICS F+ +G + +N+N SR+DVY+SH P G+SV N+LH Q +S Sbjct: 242 ASTKICNNKILWLICSEFMSLWAGSNKKNMNQSRMDVYMSHAPTGSSVHNILHIKQLYHS 301 Query: 301 GQLQAFDWGNSDQNMMHFHQLTPPLYNITKMEVPTAIWNGGQDIVADPKDVENLLPQIAN 360 + +A+DWGN NM H++Q PP+Y++T M+VPTAIW GG D++ P+DV +LPQI + Sbjct: 302 DEFRAYDWGNDADNMKHYNQSHPPIYDLTAMKVPTAIWAGGHDVLVTPQDVARILPQIKS 361 Query: 361 LIYYKLIPHYNHVDFYLGEDAPQEIYQDLIILMEEY 396 L Y+KL+P +NH DF G DAPQ +Y ++I LM+ Y Sbjct: 362 LHYFKLLPDWNHFDFVWGLDAPQRMYSEIIALMKAY 397 >gi|23200008 abhydrolase domain containing 11 isoform 1 [Homo sapiens] Length = 315 Score = 31.2 bits (69), Expect = 1.7 Identities = 34/127 (26%), Positives = 53/127 (41%), Gaps = 21/127 (16%) Query: 75 APKPAVYLQHGLIASASNWICNLPNNSLAFLLADSGYDVWLGNSRGNTWSRKHLKLSPKS 134 A PAV HGL S +N+ NS+A +LA R T ++ SP S Sbjct: 64 AALPAVVFLHGLFGSKTNF------NSIAKILAQQT------GRRVLTVDARNHGDSPHS 111 Query: 135 PEYWAFSLDEMAKYDLPATINFIIEKTGQKRLYYVGHSQGTTIAFIAFSTNPELAKKIKI 194 P+ M+ + + ++ + G VGHS G A + PEL +++ I Sbjct: 112 PD--------MSYEIMSQDLQDLLPQLGLVPCVVVGHSMGGKTAMLLALQRPELVERL-I 162 Query: 195 FFALAPV 201 ++PV Sbjct: 163 AVDISPV 169 >gi|23200012 abhydrolase domain containing 11 isoform 2 [Homo sapiens] Length = 308 Score = 31.2 bits (69), Expect = 1.7 Identities = 34/127 (26%), Positives = 53/127 (41%), Gaps = 21/127 (16%) Query: 75 APKPAVYLQHGLIASASNWICNLPNNSLAFLLADSGYDVWLGNSRGNTWSRKHLKLSPKS 134 A PAV HGL S +N+ NS+A +LA R T ++ SP S Sbjct: 57 AALPAVVFLHGLFGSKTNF------NSIAKILAQQT------GRRVLTVDARNHGDSPHS 104 Query: 135 PEYWAFSLDEMAKYDLPATINFIIEKTGQKRLYYVGHSQGTTIAFIAFSTNPELAKKIKI 194 P+ M+ + + ++ + G VGHS G A + PEL +++ I Sbjct: 105 PD--------MSYEIMSQDLQDLLPQLGLVPCVVVGHSMGGKTAMLLALQRPELVERL-I 155 Query: 195 FFALAPV 201 ++PV Sbjct: 156 AVDISPV 162 >gi|56606135 hypothetical protein LOC136242 [Homo sapiens] Length = 235 Score = 29.6 bits (65), Expect = 5.0 Identities = 15/45 (33%), Positives = 20/45 (44%) Query: 2 WQLLAAACWMLLLGSMYGYDKKGNNANPEANMNISQIISYWGYPY 46 W L A C++ L M G K E +N QI+ YW Y + Sbjct: 49 WVLAPAHCYLPNLKVMLGNFKSRVRDGTEQTINPIQIVRYWNYSH 93 >gi|115334677 retinoblastoma-binding protein 1 isoform I [Homo sapiens] Length = 1257 Score = 29.6 bits (65), Expect = 5.0 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Query: 126 KHLKLSPKSPEYWAFSLDEMAKYDLPATINFIIEKTGQKRLYYV 169 KH SP++ + W+F L+E+ + I+F+ EK + R YY+ Sbjct: 1159 KHPNSSPRTYK-WSFQLNELDNMNSTERISFLQEKLQEIRKYYM 1201 >gi|187960079 MAD2 homolog [Homo sapiens] Length = 211 Score = 29.6 bits (65), Expect = 5.0 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 5/55 (9%) Query: 270 LNMSRLDVYLSHNPAGTSVQNMLHWAQAVNSGQ-----LQAFDWGNSDQNMMHFH 319 L +S D L HNP G + ++H +A ++ F W +D+ +H H Sbjct: 128 LKISVCDAVLDHNPPGCTFTVLVHTREAATRNMEKIQVIKDFPWILADEQDVHMH 182 >gi|187960073 MAD2 homolog [Homo sapiens] Length = 211 Score = 29.6 bits (65), Expect = 5.0 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 5/55 (9%) Query: 270 LNMSRLDVYLSHNPAGTSVQNMLHWAQAVNSGQ-----LQAFDWGNSDQNMMHFH 319 L +S D L HNP G + ++H +A ++ F W +D+ +H H Sbjct: 128 LKISVCDAVLDHNPPGCTFTVLVHTREAATRNMEKIQVIKDFPWILADEQDVHMH 182 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.321 0.137 0.434 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,936,494 Number of Sequences: 37866 Number of extensions: 722451 Number of successful extensions: 1426 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 1412 Number of HSP's gapped (non-prelim): 14 length of query: 399 length of database: 18,247,518 effective HSP length: 104 effective length of query: 295 effective length of database: 14,309,454 effective search space: 4221288930 effective search space used: 4221288930 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.