Search of human proteins with 27735000

Search of human proteins with 27735000

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|27735000 Na+/K+ transporting ATPase interacting 3 [Homo
sapiens]
         (197 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|27735000 Na+/K+ transporting ATPase interacting 3 [Homo sapiens]   416   e-117
gi|94158939 T-cell lymphoma breakpoint-associated target 1 [Homo...   263   7e-71
gi|226529429 Na+/K+ transporting ATPase interacting 4 [Homo sapi...   253   1e-67
gi|13375664 Na+/K+ transporting ATPase interacting 1 [Homo sapiens]   169   2e-42
gi|169212904 PREDICTED: acyl-malonyl condensing enzyme 1-like 1 ...    33   0.20 
gi|16306483 solute carrier family 26, member 7 isoform a [Homo s...    31   0.78 
gi|20336282 solute carrier family 26, member 7 isoform b [Homo s...    31   0.78 
gi|52627215 olfactory receptor, family 6, subfamily B, member 1 ...    30   1.0  
gi|7363441 olfactory receptor, family 11, subfamily A, member 1 ...    29   3.0  
gi|11968059 matrix metalloproteinase 25 preproprotein [Homo sapi...    28   5.0  
gi|89044650 PREDICTED: acyl-malonyl condensing enzyme 1-like 1 [...    28   6.6  

>gi|27735000 Na+/K+ transporting ATPase interacting 3 [Homo sapiens]
          Length = 197

 Score =  416 bits (1068), Expect = e-117
 Identities = 197/197 (100%), Positives = 197/197 (100%)

Query: 1   MGCCTGRCSLICLCALQLVSALERQIFDFLGFQWAPILGNFLHIIVVILGLFGTIQYRPR 60
           MGCCTGRCSLICLCALQLVSALERQIFDFLGFQWAPILGNFLHIIVVILGLFGTIQYRPR
Sbjct: 1   MGCCTGRCSLICLCALQLVSALERQIFDFLGFQWAPILGNFLHIIVVILGLFGTIQYRPR 60

Query: 61  YIMVYTVWTALWVTWNVFIICFYLEVGGLSKDTDLMTFNISVHRSWWREHGPGCVRRVLP 120
           YIMVYTVWTALWVTWNVFIICFYLEVGGLSKDTDLMTFNISVHRSWWREHGPGCVRRVLP
Sbjct: 61  YIMVYTVWTALWVTWNVFIICFYLEVGGLSKDTDLMTFNISVHRSWWREHGPGCVRRVLP 120

Query: 121 PSAHGMMDDYTYVSVTGCIVDFQYLEVIHSAVQILLSLVGFVYACYVISISMEEEDTYSC 180
           PSAHGMMDDYTYVSVTGCIVDFQYLEVIHSAVQILLSLVGFVYACYVISISMEEEDTYSC
Sbjct: 121 PSAHGMMDDYTYVSVTGCIVDFQYLEVIHSAVQILLSLVGFVYACYVISISMEEEDTYSC 180

Query: 181 DLQVCKHLFIQMLQIIE 197
           DLQVCKHLFIQMLQIIE
Sbjct: 181 DLQVCKHLFIQMLQIIE 197


>gi|94158939 T-cell lymphoma breakpoint-associated target 1 [Homo
           sapiens]
          Length = 208

 Score =  263 bits (672), Expect = 7e-71
 Identities = 115/179 (64%), Positives = 147/179 (82%), Gaps = 1/179 (0%)

Query: 1   MGCCTGRCSLICLCALQLVSALERQIFDFLGFQWAPILGNFLHIIVVILGLFGTIQYRPR 60
           MG C+GRC+LI +C +QLV  LERQIFDFLG+QWAPIL NF+HII+VILGLFGTIQYRPR
Sbjct: 1   MGYCSGRCTLIFICGMQLVCVLERQIFDFLGYQWAPILANFVHIIIVILGLFGTIQYRPR 60

Query: 61  YIMVYTVWTALWVTWNVFIICFYLEVGGLSKDTDL-MTFNISVHRSWWREHGPGCVRRVL 119
           YI  Y VW  LWVTWNVF+ICFYLE G LSK+TDL +TFNIS+HRSWW E+GPGC    +
Sbjct: 61  YITGYAVWLVLWVTWNVFVICFYLEAGDLSKETDLILTFNISMHRSWWMENGPGCTVTSV 120

Query: 120 PPSAHGMMDDYTYVSVTGCIVDFQYLEVIHSAVQILLSLVGFVYACYVISISMEEEDTY 178
            P+     +D+ Y++V+GC++++QY+EV HS++QI+L+L GF+YACYV+    EEED++
Sbjct: 121 TPAPDWAPEDHRYITVSGCLLEYQYIEVAHSSLQIVLALAGFIYACYVVKCITEEEDSF 179


>gi|226529429 Na+/K+ transporting ATPase interacting 4 [Homo
           sapiens]
          Length = 208

 Score =  253 bits (645), Expect = 1e-67
 Identities = 112/178 (62%), Positives = 142/178 (79%)

Query: 1   MGCCTGRCSLICLCALQLVSALERQIFDFLGFQWAPILGNFLHIIVVILGLFGTIQYRPR 60
           MG C+GRC+L+ LCA QLV+ALERQ+FDFLG+QWAPIL NF+HII+VILGLFGTIQYR R
Sbjct: 1   MGSCSGRCALVVLCAFQLVAALERQVFDFLGYQWAPILANFVHIIIVILGLFGTIQYRLR 60

Query: 61  YIMVYTVWTALWVTWNVFIICFYLEVGGLSKDTDLMTFNISVHRSWWREHGPGCVRRVLP 120
           Y+MVYT+W A+WVTWNVFIICFYLEVGGL KD++L+TF++S HRSWWRE  PGC+   +P
Sbjct: 61  YVMVYTLWAAVWVTWNVFIICFYLEVGGLLKDSELLTFSLSRHRSWWRERWPGCLHEEVP 120

Query: 121 PSAHGMMDDYTYVSVTGCIVDFQYLEVIHSAVQILLSLVGFVYACYVISISMEEEDTY 178
               G       VS  GC ++  Y+E +HS +QIL++L+GFV  C V+S+  EEED++
Sbjct: 121 AVGLGAPHGQALVSGAGCALEPSYVEALHSCLQILIALLGFVCGCQVVSVFTEEEDSF 178


>gi|13375664 Na+/K+ transporting ATPase interacting 1 [Homo sapiens]
          Length = 163

 Score =  169 bits (427), Expect = 2e-42
 Identities = 77/136 (56%), Positives = 105/136 (77%), Gaps = 4/136 (2%)

Query: 45  IVVILGLFGTIQYRPRYIMVYTVWTALWVTWNVFIICFYLEVGGLSKDTD-LMTFNISVH 103
           + VILG+FGT+QYR RY+++Y  W  LWV WN FIICFYLEVG LS+D D +MTFN S+H
Sbjct: 1   MAVILGIFGTVQYRSRYLILYAAWLVLWVGWNAFIICFYLEVGQLSQDRDFIMTFNTSLH 60

Query: 104 RSWWREHGPGC-VRRVLPPSAHGMMDDYTYVSVTGCIVDFQYLEVIHSAVQILLSLVGFV 162
           RSWW E+GPGC V  VL  ++   ++D+  +SVTGC++D+ Y+E + SA+QI L+L GFV
Sbjct: 61  RSWWMENGPGCLVTPVL--NSRLALEDHHVISVTGCLLDYPYIEALSSALQIFLALFGFV 118

Query: 163 YACYVISISMEEEDTY 178
           +ACYV  + +EEED++
Sbjct: 119 FACYVSKVFLEEEDSF 134


>gi|169212904 PREDICTED: acyl-malonyl condensing enzyme 1-like 1
           [Homo sapiens]
          Length = 338

 Score = 32.7 bits (73), Expect = 0.20
 Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 32/121 (26%)

Query: 5   TGRCSLIC-----LCALQLVSALERQIFDFLGFQWAPILGNFLHIIVVILGLFGTIQYRP 59
           TG  + +C     +C+  L   L+ Q+    G+ W  +LG+ L +I+++          P
Sbjct: 127 TGNAATVCKRSSTVCSAVLTLCLKSQVLS--GYDWCGLLGSILGLIIIV---------GP 175

Query: 60  RYIMVYTVWTALWVTWNVFIICFYLE--VGGLSKDTDLMTFNISVHRSWWREHGPGCVRR 117
                  +WT    T  V+ I  Y++  +GGL+     ++  + V+RS    H P C+  
Sbjct: 176 E------LWTLQEGTTGVYTILGYVQAFLGGLA-----LSLGLLVYRSL---HFPSCLPT 221

Query: 118 V 118
           V
Sbjct: 222 V 222


>gi|16306483 solute carrier family 26, member 7 isoform a [Homo
           sapiens]
          Length = 656

 Score = 30.8 bits (68), Expect = 0.78
 Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 12/83 (14%)

Query: 8   CSLICLCALQLVSALERQIFDFLGFQWAPILGNFLHIIVVILGLFGT-IQYRP--RYIMV 64
           C + C+  L ++ A+   ++      W P+    +   ++++GL G  IQ+R   +Y  V
Sbjct: 383 CLISCIFVLIVIYAIGPLLY------WLPMC---VLASIIVVGLKGMLIQFRDLKKYWNV 433

Query: 65  YTVWTALWVTWNVFIICFYLEVG 87
             +   +WV+  VF ICF   VG
Sbjct: 434 DKIDWGIWVSTYVFTICFAANVG 456


>gi|20336282 solute carrier family 26, member 7 isoform b [Homo
           sapiens]
          Length = 663

 Score = 30.8 bits (68), Expect = 0.78
 Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 12/83 (14%)

Query: 8   CSLICLCALQLVSALERQIFDFLGFQWAPILGNFLHIIVVILGLFGT-IQYRP--RYIMV 64
           C + C+  L ++ A+   ++      W P+    +   ++++GL G  IQ+R   +Y  V
Sbjct: 383 CLISCIFVLIVIYAIGPLLY------WLPMC---VLASIIVVGLKGMLIQFRDLKKYWNV 433

Query: 65  YTVWTALWVTWNVFIICFYLEVG 87
             +   +WV+  VF ICF   VG
Sbjct: 434 DKIDWGIWVSTYVFTICFAANVG 456


>gi|52627215 olfactory receptor, family 6, subfamily B, member 1
           [Homo sapiens]
          Length = 311

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 22/115 (19%), Positives = 45/115 (39%), Gaps = 7/115 (6%)

Query: 47  VILGLFGTIQYRPRYIMVYTVWTALWVTWNVFIICFYLEVGGLSKDTDLMTFNISVHRSW 106
           +++G  G++  R    +++ V   L V  NV II   L+   L K       N+S   +W
Sbjct: 13  ILVGFPGSLSMRAAMFLIFLVAYILTVAENVIIILLVLQNRPLHKPMYFFLANLSFLETW 72

Query: 107 WREHGPGCVRRVLPPSAHGMMDDYTYVSVTGCIVDFQYLEVIHSAVQILLSLVGF 161
           +       +   +P            +S T C++   +   +     +LL+ + +
Sbjct: 73  Y-------ISVTVPKLLFSFWSVNNSISFTLCMIQLYFFIALMCTECVLLAAMAY 120


>gi|7363441 olfactory receptor, family 11, subfamily A, member 1
           [Homo sapiens]
          Length = 315

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 24/115 (20%), Positives = 49/115 (42%), Gaps = 8/115 (6%)

Query: 47  VILGLFGTIQYRPRYIMVYTVWTALWVTWNVFIICFYLEVGGLSKDTDLMTFNISVHRSW 106
           V+LG +   +    + +V+T      +  N+ II   +    L K   +   N+S     
Sbjct: 15  VLLGFYDIPELHFLFFIVFTAVYVFIIIGNMLIIVAVVSSQRLHKPMYIFLANLSFLDIL 74

Query: 107 WREHGPGCVRRVLPPSAHGMMDDYTYVSVTGCIVDFQYLEVIHSAVQILLSLVGF 161
           +          V+P    G + + T +SV GC++ F     + +A  +LL+++ +
Sbjct: 75  YTS-------AVMPKMLEGFLQEAT-ISVAGCLLQFFIFGSLATAECLLLAVMAY 121


>gi|11968059 matrix metalloproteinase 25 preproprotein [Homo
           sapiens]
          Length = 562

 Score = 28.1 bits (61), Expect = 5.0
 Identities = 11/30 (36%), Positives = 18/30 (60%)

Query: 48  ILGLFGTIQYRPRYIMVYTVWTALWVTWNV 77
           +LG+ G ++ R RY +  +VW    +TW V
Sbjct: 95  VLGVAGLVRRRRRYALSGSVWKKRTLTWRV 124


>gi|89044650 PREDICTED: acyl-malonyl condensing enzyme 1-like 1
           [Homo sapiens]
          Length = 338

 Score = 27.7 bits (60), Expect = 6.6
 Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 13  LCALQLVSALERQIFDFLGFQWAPILGNFLHIIVVI 48
           +C+  L   LE Q+    G+ W  +LG+ L +I+++
Sbjct: 140 VCSAILTLCLESQVLS--GYDWCGLLGSILGLIIIV 173


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.333    0.145    0.492 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,624,398
Number of Sequences: 37866
Number of extensions: 308709
Number of successful extensions: 844
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 832
Number of HSP's gapped (non-prelim): 12
length of query: 197
length of database: 18,247,518
effective HSP length: 97
effective length of query: 100
effective length of database: 14,574,516
effective search space: 1457451600
effective search space used: 1457451600
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.