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Search of human proteins with 239757320
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757320 PREDICTED: hypothetical protein [Homo sapiens]
(194 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757320 PREDICTED: hypothetical protein [Homo sapiens] 410 e-115
gi|239751827 PREDICTED: hypothetical protein [Homo sapiens] 410 e-115
gi|239746318 PREDICTED: hypothetical protein XP_002343694 [Homo ... 410 e-115
gi|20162554 Kruppel-like factor 14 [Homo sapiens] 32 0.26
gi|116268127 kinase non-catalytic C-lobe domain (KIND) containin... 32 0.26
gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens] 32 0.26
gi|58218970 protease, serine, 36 [Homo sapiens] 32 0.44
gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens] 31 0.76
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s... 30 0.99
gi|222144283 hypothetical protein LOC65998 [Homo sapiens] 30 1.3
gi|98961138 ZXD family zinc finger C isoform 2 [Homo sapiens] 30 1.7
gi|98961133 ZXD family zinc finger C isoform 1 [Homo sapiens] 30 1.7
gi|113423021 PREDICTED: similar to hCG1820409 [Homo sapiens] 29 2.2
gi|113422497 PREDICTED: similar to hCG1820409 [Homo sapiens] 29 2.2
gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens] 29 2.2
gi|158534055 round spermatid basic protein 1-like [Homo sapiens] 29 2.2
gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens] 29 2.2
gi|208609985 SH2 domain containing 3A [Homo sapiens] 29 2.9
gi|209571555 von Willebrand factor D and EGF domains [Homo sapiens] 28 3.7
gi|239757693 PREDICTED: hypothetical protein XP_002345522 [Homo ... 28 3.7
gi|239757322 PREDICTED: hypothetical protein [Homo sapiens] 28 3.7
gi|239751829 PREDICTED: hypothetical protein [Homo sapiens] 28 3.7
gi|239746320 PREDICTED: hypothetical protein XP_002343695 [Homo ... 28 3.7
gi|89886352 hypothetical protein LOC339229 [Homo sapiens] 28 3.7
gi|239753797 PREDICTED: hypothetical protein [Homo sapiens] 28 4.9
gi|239748346 PREDICTED: hypothetical protein XP_002346641 [Homo ... 28 4.9
gi|166235901 B-cell linker isoform 2 [Homo sapiens] 28 4.9
gi|7019535 B-cell linker isoform 1 [Homo sapiens] 28 4.9
gi|14043024 BCL2-associated athanogene 3 [Homo sapiens] 28 4.9
gi|134288863 hypothetical protein LOC285093 [Homo sapiens] 28 4.9
>gi|239757320 PREDICTED: hypothetical protein [Homo sapiens]
Length = 194
Score = 410 bits (1053), Expect = e-115
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 1 MVLNKMKVLRAIEGKEKKREPAHYKATIPTSIPRTGPQGGGCIVRRERHGMLAPGIYRTA 60
MVLNKMKVLRAIEGKEKKREPAHYKATIPTSIPRTGPQGGGCIVRRERHGMLAPGIYRTA
Sbjct: 1 MVLNKMKVLRAIEGKEKKREPAHYKATIPTSIPRTGPQGGGCIVRRERHGMLAPGIYRTA 60
Query: 61 RERFRNAGKSNLQSGQMSSPHPAKPQKANQMVSEQQPVGCECCPLSVPFCELAPSTPSWA 120
RERFRNAGKSNLQSGQMSSPHPAKPQKANQMVSEQQPVGCECCPLSVPFCELAPSTPSWA
Sbjct: 61 RERFRNAGKSNLQSGQMSSPHPAKPQKANQMVSEQQPVGCECCPLSVPFCELAPSTPSWA 120
Query: 121 TSSQRHNSSTPPQSFWNASLGTPAPTGCWDLHVESQGWLHATAKGMLFCLGEGLLSLPAG 180
TSSQRHNSSTPPQSFWNASLGTPAPTGCWDLHVESQGWLHATAKGMLFCLGEGLLSLPAG
Sbjct: 121 TSSQRHNSSTPPQSFWNASLGTPAPTGCWDLHVESQGWLHATAKGMLFCLGEGLLSLPAG 180
Query: 181 PGTGLAATPAPKIR 194
PGTGLAATPAPKIR
Sbjct: 181 PGTGLAATPAPKIR 194
>gi|239751827 PREDICTED: hypothetical protein [Homo sapiens]
Length = 194
Score = 410 bits (1053), Expect = e-115
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 1 MVLNKMKVLRAIEGKEKKREPAHYKATIPTSIPRTGPQGGGCIVRRERHGMLAPGIYRTA 60
MVLNKMKVLRAIEGKEKKREPAHYKATIPTSIPRTGPQGGGCIVRRERHGMLAPGIYRTA
Sbjct: 1 MVLNKMKVLRAIEGKEKKREPAHYKATIPTSIPRTGPQGGGCIVRRERHGMLAPGIYRTA 60
Query: 61 RERFRNAGKSNLQSGQMSSPHPAKPQKANQMVSEQQPVGCECCPLSVPFCELAPSTPSWA 120
RERFRNAGKSNLQSGQMSSPHPAKPQKANQMVSEQQPVGCECCPLSVPFCELAPSTPSWA
Sbjct: 61 RERFRNAGKSNLQSGQMSSPHPAKPQKANQMVSEQQPVGCECCPLSVPFCELAPSTPSWA 120
Query: 121 TSSQRHNSSTPPQSFWNASLGTPAPTGCWDLHVESQGWLHATAKGMLFCLGEGLLSLPAG 180
TSSQRHNSSTPPQSFWNASLGTPAPTGCWDLHVESQGWLHATAKGMLFCLGEGLLSLPAG
Sbjct: 121 TSSQRHNSSTPPQSFWNASLGTPAPTGCWDLHVESQGWLHATAKGMLFCLGEGLLSLPAG 180
Query: 181 PGTGLAATPAPKIR 194
PGTGLAATPAPKIR
Sbjct: 181 PGTGLAATPAPKIR 194
>gi|239746318 PREDICTED: hypothetical protein XP_002343694 [Homo
sapiens]
Length = 194
Score = 410 bits (1053), Expect = e-115
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 1 MVLNKMKVLRAIEGKEKKREPAHYKATIPTSIPRTGPQGGGCIVRRERHGMLAPGIYRTA 60
MVLNKMKVLRAIEGKEKKREPAHYKATIPTSIPRTGPQGGGCIVRRERHGMLAPGIYRTA
Sbjct: 1 MVLNKMKVLRAIEGKEKKREPAHYKATIPTSIPRTGPQGGGCIVRRERHGMLAPGIYRTA 60
Query: 61 RERFRNAGKSNLQSGQMSSPHPAKPQKANQMVSEQQPVGCECCPLSVPFCELAPSTPSWA 120
RERFRNAGKSNLQSGQMSSPHPAKPQKANQMVSEQQPVGCECCPLSVPFCELAPSTPSWA
Sbjct: 61 RERFRNAGKSNLQSGQMSSPHPAKPQKANQMVSEQQPVGCECCPLSVPFCELAPSTPSWA 120
Query: 121 TSSQRHNSSTPPQSFWNASLGTPAPTGCWDLHVESQGWLHATAKGMLFCLGEGLLSLPAG 180
TSSQRHNSSTPPQSFWNASLGTPAPTGCWDLHVESQGWLHATAKGMLFCLGEGLLSLPAG
Sbjct: 121 TSSQRHNSSTPPQSFWNASLGTPAPTGCWDLHVESQGWLHATAKGMLFCLGEGLLSLPAG 180
Query: 181 PGTGLAATPAPKIR 194
PGTGLAATPAPKIR
Sbjct: 181 PGTGLAATPAPKIR 194
>gi|20162554 Kruppel-like factor 14 [Homo sapiens]
Length = 323
Score = 32.3 bits (72), Expect = 0.26
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 7/120 (5%)
Query: 30 TSIPRTGPQGGGCIVRRERHGMLAPGIYRTARERFRNAGKSNLQ--SGQMSSPHPAKPQK 87
+++P GP G + + + +PG A + ++L+ SG+ S + + +
Sbjct: 50 SALPGPGPSGPASVPQLPQVPAPSPGAGGAAPHLLAASVWADLRGSSGEGSWENSGEAPR 109
Query: 88 ANQMVSEQQPVGCECCPLSVPFCELAPSTPSWATSSQRHNSSTPPQSFWNASLGTPAPTG 147
A+ S+ P C + P ELAP++ + A + +S P A+ G PA +G
Sbjct: 110 ASSGFSDPIP-----CSVQTPCSELAPASGAAAVCAPESSSDAPAVPSAPAAPGAPAASG 164
>gi|116268127 kinase non-catalytic C-lobe domain (KIND) containing 1
isoform a [Homo sapiens]
Length = 1749
Score = 32.3 bits (72), Expect = 0.26
Identities = 42/134 (31%), Positives = 52/134 (38%), Gaps = 21/134 (15%)
Query: 13 EGKEKKREPAHYKA----TIPTSIPRTGPQG------GGCIVRRERHGMLAPGIYRTARE 62
EG+EK AH + T +P GPQG G + R G P A +
Sbjct: 710 EGEEKLSLEAHAGSPSLKTPDGPVPGPGPQGAAPEPLGASVQRDSAQGRPCPPPQAPANQ 769
Query: 63 RFRNAGKSNLQSGQMSSPHPAKPQKANQMVSEQQPVGCECCPLSVPFCELAPST--PSWA 120
G S+ G SP PA P KA+ + EQ P E P V L P P+ A
Sbjct: 770 P---EGASSAAPG---SPVPAPPTKASALPVEQGP--AEPIPPGVASGGLRPDALGPTTA 821
Query: 121 TSSQRHNSSTPPQS 134
RH PP+S
Sbjct: 822 HHGPRH-PPKPPRS 834
>gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens]
Length = 1603
Score = 32.3 bits (72), Expect = 0.26
Identities = 36/121 (29%), Positives = 48/121 (39%), Gaps = 20/121 (16%)
Query: 33 PRTGPQGGGCIVRRERHGMLAPGIY----RTARERFRNAGKSNLQ--SGQMSSPHPAKPQ 86
PR G GG C ++ER G A + + F+++ L SG SS P Q
Sbjct: 1271 PRGGRGGGACSAKKERGGAAAKAKFIPKPQPVNPLFQDSPDLGLDYYSGD-SSMSPLPSQ 1329
Query: 87 KANQMVSEQQPVGCECCPLSVPFCELAPSTPSWATSSQRHNSSTPPQSFWNASLGTPAPT 146
V E+ P C P+ + PSTPS T Q + +P SLG P
Sbjct: 1330 SRAFGVGERDP-----CDFIGPY-SMNPSTPSDGTFGQGFHCDSP-------SLGAPELD 1376
Query: 147 G 147
G
Sbjct: 1377 G 1377
>gi|58218970 protease, serine, 36 [Homo sapiens]
Length = 855
Score = 31.6 bits (70), Expect = 0.44
Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 16/90 (17%)
Query: 78 SSPHPAKPQKANQMVSEQQPVGCECCPLSVPFCELAPSTPSWATSSQRHNSSTPPQSFWN 137
S P PA P + + S+ Q E C +++P C AP +W W
Sbjct: 293 SEPGPAFPTQPQKTQSDPQEPREENCTIALPECGKAPRPGAWP---------------WE 337
Query: 138 ASLGTPAPTGCWDLHVESQGWLHATAKGML 167
A + P C V S+ W+ A A L
Sbjct: 338 AQVMVPGSRPCHGALV-SESWVLAPASCFL 366
>gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens]
Length = 2382
Score = 30.8 bits (68), Expect = 0.76
Identities = 34/131 (25%), Positives = 50/131 (38%), Gaps = 20/131 (15%)
Query: 18 KREPAHYKATIPTSIPRTGPQGGGCIVRRERHGMLAPGIYRTARERFRNAGKSNLQSGQM 77
+ E AH T+P IP T + + HG+ P A+ + + S+ +G
Sbjct: 680 QHEQAHSTGTVPGHIPST------VQAQSQPHGVYPPS--SVAQGQSQGQPSSSSLTGVS 731
Query: 78 SS---PHPAKPQKANQMVSEQQPVGCECCPLSVPFCELAPSTPSWATSSQRHNSSTPPQS 134
SS HP + Q Q QQ +V + ST S AT++Q + PQ
Sbjct: 732 SSQPIQHPQQQQGIQQTAPPQQ---------TVQYSLSQTSTSSEATTAQPVSQPQAPQV 782
Query: 135 FWNASLGTPAP 145
S G P
Sbjct: 783 LPQVSAGKQLP 793
>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
sapiens]
Length = 4911
Score = 30.4 bits (67), Expect = 0.99
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 91 MVSEQQPVGCECCPLSVPFCELAPSTPSWATSSQRHNSSTPPQSFWNASLGTPAPTGCWD 150
+V E+ P P+ P + PST ++ S+R++ T P + + AS P+P G
Sbjct: 4023 LVKEEPPE-----PVPSPIIPILPSTAGKSSESRRNDIKTEPGTLYFASPFGPSPNGPRS 4077
Query: 151 LHVESQGWLHATA 163
+ LH TA
Sbjct: 4078 GLISVAITLHPTA 4090
>gi|222144283 hypothetical protein LOC65998 [Homo sapiens]
Length = 678
Score = 30.0 bits (66), Expect = 1.3
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 11 AIEGKEKKREPAHYKATIPTSIPR---TGPQGGGCIVRRERHGMLAPGIYRTARERFRNA 67
A E +E++ E A +P P+ P GGGC R+ R G +AP R R A
Sbjct: 187 AEEEEEEEEEEEEEGAGVPACPPKGPGKAPAGGGC-RRQRRGGPVAPRARRLRLSASRRA 245
Query: 68 GKS 70
G S
Sbjct: 246 GGS 248
>gi|98961138 ZXD family zinc finger C isoform 2 [Homo sapiens]
Length = 710
Score = 29.6 bits (65), Expect = 1.7
Identities = 43/169 (25%), Positives = 61/169 (36%), Gaps = 13/169 (7%)
Query: 26 ATIPTSIPRTGPQGGGCIVRRERHGML--APGIYRTARERFRNAGKSNLQSGQMSSPHPA 83
A +P R G GGG R L +P R R G + G+ S P P
Sbjct: 5 ALLPAPTARGGQHGGGPGPLRRAPAPLGASPARRRLLLVRGPEDGGPGARPGEASGPSP- 63
Query: 84 KPQKANQMVSEQQPVGCECCPLSVPFCELAPSTPSWATSSQRHNSSTPPQSFWNASLGTP 143
P + + V E P E A S A R N ++ P+ + P
Sbjct: 64 -PPAEDDSDGDSFLVLLEV-PHGGAAAEAAGSQE--AEPGSRVNLASRPEQGPSGPAAPP 119
Query: 144 APTGCWDLHVESQGWLHATAKGMLFCLGEGLLSLPAGPGTGLAATPAPK 192
P V G + +++ +L L G+L+L A PG A AP+
Sbjct: 120 GPG------VAPAGAVTISSQDLLVRLDRGVLALSAPPGPATAGAAAPR 162
>gi|98961133 ZXD family zinc finger C isoform 1 [Homo sapiens]
Length = 858
Score = 29.6 bits (65), Expect = 1.7
Identities = 43/169 (25%), Positives = 61/169 (36%), Gaps = 13/169 (7%)
Query: 26 ATIPTSIPRTGPQGGGCIVRRERHGML--APGIYRTARERFRNAGKSNLQSGQMSSPHPA 83
A +P R G GGG R L +P R R G + G+ S P P
Sbjct: 5 ALLPAPTARGGQHGGGPGPLRRAPAPLGASPARRRLLLVRGPEDGGPGARPGEASGPSP- 63
Query: 84 KPQKANQMVSEQQPVGCECCPLSVPFCELAPSTPSWATSSQRHNSSTPPQSFWNASLGTP 143
P + + V E P E A S A R N ++ P+ + P
Sbjct: 64 -PPAEDDSDGDSFLVLLEV-PHGGAAAEAAGSQE--AEPGSRVNLASRPEQGPSGPAAPP 119
Query: 144 APTGCWDLHVESQGWLHATAKGMLFCLGEGLLSLPAGPGTGLAATPAPK 192
P V G + +++ +L L G+L+L A PG A AP+
Sbjct: 120 GPG------VAPAGAVTISSQDLLVRLDRGVLALSAPPGPATAGAAAPR 162
>gi|113423021 PREDICTED: similar to hCG1820409 [Homo sapiens]
Length = 578
Score = 29.3 bits (64), Expect = 2.2
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 13/95 (13%)
Query: 13 EGKEKKREPAHYKATIPTSIPRTGPQGGGCIVRRERHGMLAPGIYRTARERFRNAGKSNL 72
E +EK ++P A I S+P P+ GG G A G R+R G++N
Sbjct: 85 EDEEKAQQPT---ALILGSLPPRLPRRGG-------RGDSAGG---GGRDREAGRGEANP 131
Query: 73 QSGQMSSPHPAKPQKANQMVSEQQPVGCECCPLSV 107
S P KP+ Q + + +C PL V
Sbjct: 132 AHSARSPERPRKPEAGAQDFRDSERTDRDCQPLRV 166
>gi|113422497 PREDICTED: similar to hCG1820409 [Homo sapiens]
Length = 578
Score = 29.3 bits (64), Expect = 2.2
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 13/95 (13%)
Query: 13 EGKEKKREPAHYKATIPTSIPRTGPQGGGCIVRRERHGMLAPGIYRTARERFRNAGKSNL 72
E +EK ++P A I S+P P+ GG G A G R+R G++N
Sbjct: 85 EDEEKAQQPT---ALILGSLPPRLPRRGG-------RGDSAGG---GGRDREAGRGEANP 131
Query: 73 QSGQMSSPHPAKPQKANQMVSEQQPVGCECCPLSV 107
S P KP+ Q + + +C PL V
Sbjct: 132 AHSARSPERPRKPEAGAQDFRDSERTDRDCQPLRV 166
>gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens]
Length = 548
Score = 29.3 bits (64), Expect = 2.2
Identities = 34/127 (26%), Positives = 45/127 (35%), Gaps = 16/127 (12%)
Query: 80 PHPAKPQKANQMVSEQQ--PVGCECCPLSVPFCELAPST------PSWATSSQRHNSSTP 131
P PA P A+ V++ + P G E S A T PSW R ++ P
Sbjct: 398 PPPALPPAADAPVTQGEVVPTGSEQTTESETPVPAAAETADPLFYPSWYKGQTRKATTNP 457
Query: 132 PQSFWNASLGTPAPTGCWDLHVESQGWLHATAKGMLFCLGE--------GLLSLPAGPGT 183
P + + LG P G D +V A A G+ + A P
Sbjct: 458 PCTPGSEGLGQIGPPGSEDSNVRKAEVAAAAASERAAVSGKETSAPAATSQIGFEAPPLQ 517
Query: 184 GLAATPA 190
G AA PA
Sbjct: 518 GQAAAPA 524
>gi|158534055 round spermatid basic protein 1-like [Homo sapiens]
Length = 846
Score = 29.3 bits (64), Expect = 2.2
Identities = 40/131 (30%), Positives = 50/131 (38%), Gaps = 18/131 (13%)
Query: 21 PAH-YKATIPTS-IPRTGPQGGGCIVRRERHGMLAPGIYRT----ARERFRNAGKSNLQS 74
P H A PT+ + P G + R+ G L+ RT A R G S S
Sbjct: 7 PVHCVAAAAPTATVSEKEPFGKLQLSSRDPPGSLSAKKVRTEEKKAPRRVNGEGGSGGNS 66
Query: 75 GQMSSPHPAKPQKANQMVSEQQPVGCECCPLSVPFCELAPSTPSWATSSQRHNSSTPPQS 134
Q+ P PQ S P PLS APS PS + SS ++ T S
Sbjct: 67 RQLQPPAAPSPQ------SYGSPASWSFAPLSA-----APS-PSSSRSSFSFSAGTAVPS 114
Query: 135 FWNASLGTPAP 145
+ASL P P
Sbjct: 115 SASASLSQPVP 125
>gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens]
Length = 845
Score = 29.3 bits (64), Expect = 2.2
Identities = 41/165 (24%), Positives = 51/165 (30%), Gaps = 15/165 (9%)
Query: 29 PTSIPRTGPQGGGCIVRRERHGMLAPGIYRTARERFRNAGKSNLQSGQMSSPHPAKPQKA 88
P+ P T GGG L P T+ G N S Q ++P Q
Sbjct: 487 PSQGPSTTSSGGGTGPHPPSGTTLRPP---TSSTPGGPPGAENSTSHQPATPGGDTAQTP 543
Query: 89 NQMVSEQQPVGCECCPLSVPFCELAPSTPSWATSS--QRHNSSTPPQSFWNASLGTPAPT 146
S+ P G P+TPS T+ + S P S ++ PA
Sbjct: 544 KPGTSQPMPPGVGTSTSH------QPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPATP 597
Query: 147 GCWDLHVESQGWLHATAKGMLFCLGEGLLSLPAGPGTGLAATPAP 191
G G GM G P PG G A TP P
Sbjct: 598 GGGTAQTPEAGTSQPMPPGM----GTSTSHQPTTPGGGTAQTPEP 638
>gi|208609985 SH2 domain containing 3A [Homo sapiens]
Length = 576
Score = 28.9 bits (63), Expect = 2.9
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Query: 75 GQMSSPHPAKPQKANQMVSEQQPVGCECCPLSVPFCELAPSTPSWATSSQRHNSSTPPQS 134
GQ+ + P KP + S + P E P +CEL P PS +S + P
Sbjct: 203 GQLQAKAPTKPPRTP---SFELPDASERPPT---YCELVPRVPSVQGTSPSQSCPEPEAP 256
Query: 135 FWNA 138
+W A
Sbjct: 257 WWEA 260
>gi|209571555 von Willebrand factor D and EGF domains [Homo sapiens]
Length = 1590
Score = 28.5 bits (62), Expect = 3.7
Identities = 23/78 (29%), Positives = 29/78 (37%), Gaps = 8/78 (10%)
Query: 94 EQQPVGCECCPLSVPFCELAPSTPSWATSSQRHNSS-------TPPQSFWNASLGTPAPT 146
E + CE L E P P + T + HNS T Q F L PT
Sbjct: 954 ELPSIKCEVTKLQYNSSEWMPGEPIY-TQTVFHNSRAVDCQLPTDVQQFDTMDLVGGKPT 1012
Query: 147 GCWDLHVESQGWLHATAK 164
G W L V + G+ + K
Sbjct: 1013 GKWQLKVSNDGYKFSNPK 1030
>gi|239757693 PREDICTED: hypothetical protein XP_002345522 [Homo
sapiens]
Length = 210
Score = 28.5 bits (62), Expect = 3.7
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 10/63 (15%)
Query: 73 QSGQMSSPHPAKPQKAN---------QMVSEQQPVGCECCPLSVPFCEL-APSTPSWATS 122
+ GQ+SSPHP A+ + +E+Q P SV C+ +P+ P +A+
Sbjct: 49 KQGQLSSPHPTPSSPAHLYGNGPGRTRAAAERQSHRFRSRPGSVRMCDTPSPAPPPYASP 108
Query: 123 SQR 125
QR
Sbjct: 109 RQR 111
>gi|239757322 PREDICTED: hypothetical protein [Homo sapiens]
Length = 83
Score = 28.5 bits (62), Expect = 3.7
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 10/52 (19%)
Query: 100 CECCPLSVP---FCELAPST--PSWATSSQRHNSSTP--PQSFWNASLGTPA 144
C CC S+ +C L S SWA S+ H SS+P P + W +G PA
Sbjct: 14 CRCCSSSLTRRSYCALRSSAIRRSWAPISRAHCSSSPRTPGAAW---VGPPA 62
>gi|239751829 PREDICTED: hypothetical protein [Homo sapiens]
Length = 83
Score = 28.5 bits (62), Expect = 3.7
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 10/52 (19%)
Query: 100 CECCPLSVP---FCELAPST--PSWATSSQRHNSSTP--PQSFWNASLGTPA 144
C CC S+ +C L S SWA S+ H SS+P P + W +G PA
Sbjct: 14 CRCCSSSLTRRSYCALRSSAIRRSWAPISRAHCSSSPRTPGAAW---VGPPA 62
>gi|239746320 PREDICTED: hypothetical protein XP_002343695 [Homo
sapiens]
Length = 83
Score = 28.5 bits (62), Expect = 3.7
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 10/52 (19%)
Query: 100 CECCPLSVP---FCELAPST--PSWATSSQRHNSSTP--PQSFWNASLGTPA 144
C CC S+ +C L S SWA S+ H SS+P P + W +G PA
Sbjct: 14 CRCCSSSLTRRSYCALRSSAIRRSWAPISRAHCSSSPRTPGAAW---VGPPA 62
>gi|89886352 hypothetical protein LOC339229 [Homo sapiens]
Length = 147
Score = 28.5 bits (62), Expect = 3.7
Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 9/72 (12%)
Query: 39 GGGCIVRRERHGMLAPGIYRTARERFRNAGKSNLQSGQMSSPHPAKPQKANQMVSEQQPV 98
GGG ++R G AP R +F G +++ G + +P KA+ Q P
Sbjct: 36 GGGSFLQRHHPGAQAPD----GRRKF---GTDHVEVGSQAGADGTRPPKASLPPELQPPT 88
Query: 99 GCECCPLSVPFC 110
CC P C
Sbjct: 89 --NCCMSGCPNC 98
>gi|239753797 PREDICTED: hypothetical protein [Homo sapiens]
Length = 864
Score = 28.1 bits (61), Expect = 4.9
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 7/49 (14%)
Query: 102 CCPLSVPFCELAP-------STPSWATSSQRHNSSTPPQSFWNASLGTP 143
C P VP +AP S P +SSQR TP + S G+P
Sbjct: 497 CAPGQVPAAAVAPTSSQETYSVPQGRSSSQRARGKTPSSPTLSPSRGSP 545
>gi|239748346 PREDICTED: hypothetical protein XP_002346641 [Homo
sapiens]
Length = 894
Score = 28.1 bits (61), Expect = 4.9
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 7/49 (14%)
Query: 102 CCPLSVPFCELAP-------STPSWATSSQRHNSSTPPQSFWNASLGTP 143
C P VP +AP S P +SSQR TP + S G+P
Sbjct: 497 CAPGQVPAAAVAPTSSQETYSVPQGRSSSQRARGKTPSSPTLSPSRGSP 545
>gi|166235901 B-cell linker isoform 2 [Homo sapiens]
Length = 433
Score = 28.1 bits (61), Expect = 4.9
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 106 SVPFCELAPSTPSWATSSQRHNSSTPPQSFWNASLGTPAPTG 147
S PF + PS PSW + R S+ P + P P G
Sbjct: 129 SPPFSKTLPSKPSWPSEKARLTSTLPALTALQKPQVPPKPKG 170
>gi|7019535 B-cell linker isoform 1 [Homo sapiens]
Length = 456
Score = 28.1 bits (61), Expect = 4.9
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 106 SVPFCELAPSTPSWATSSQRHNSSTPPQSFWNASLGTPAPTG 147
S PF + PS PSW + R S+ P + P P G
Sbjct: 129 SPPFSKTLPSKPSWPSEKARLTSTLPALTALQKPQVPPKPKG 170
>gi|14043024 BCL2-associated athanogene 3 [Homo sapiens]
Length = 575
Score = 28.1 bits (61), Expect = 4.9
Identities = 27/117 (23%), Positives = 43/117 (36%), Gaps = 14/117 (11%)
Query: 16 EKKREPAHYKATIPTSIPRTGPQGGGCIVRRERHGMLAPGIYRTARERFRNAGKSNLQSG 75
++ ++P ++ T P S P P+ V E L PG + ++
Sbjct: 300 DRPQQPMTHRETAPVSQPENKPESKPGPVGPE----LPPG----------HIPIQVIRKE 345
Query: 76 QMSSPHPAKPQKANQMVSEQQPVGCECCPLSVPFCELAPSTPSWATSSQRHNSSTPP 132
S P KP ++ V + P CP P PS+P + +R ST P
Sbjct: 346 VDSKPVSQKPPPPSEKVEVKVPPAPVPCPPPSPGPSAVPSSPKSVATEERAAPSTAP 402
>gi|134288863 hypothetical protein LOC285093 [Homo sapiens]
Length = 572
Score = 28.1 bits (61), Expect = 4.9
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 100 CECCPLSVPFCELAPSTPSWATSSQRHNSSTPPQSFW----NASLGTPAPTGCWDL 151
CE C L V F + AP P+W+ ++ + N P + W S G P T DL
Sbjct: 144 CEACELGVCFLQKAPD-PAWSANATKGNF---PATAWGGTGTVSRGKPLSTPGDDL 195
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.131 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,645,588
Number of Sequences: 37866
Number of extensions: 519507
Number of successful extensions: 1778
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 1754
Number of HSP's gapped (non-prelim): 68
length of query: 194
length of database: 18,247,518
effective HSP length: 97
effective length of query: 97
effective length of database: 14,574,516
effective search space: 1413728052
effective search space used: 1413728052
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.