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Search of human proteins with 239747784
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747784 PREDICTED: hypothetical protein [Homo sapiens]
(75 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747784 PREDICTED: hypothetical protein [Homo sapiens] 157 1e-39
gi|169163288 PREDICTED: hypothetical protein [Homo sapiens] 157 1e-39
gi|169174738 PREDICTED: hypothetical protein [Homo sapiens] 144 1e-35
gi|239743760 PREDICTED: hypothetical protein XP_002342953 [Homo ... 144 1e-35
gi|239758099 PREDICTED: hypothetical protein XP_002346294 [Homo ... 125 7e-30
gi|169178848 PREDICTED: hypothetical protein [Homo sapiens] 125 7e-30
gi|169215257 PREDICTED: hypothetical protein [Homo sapiens] 122 5e-29
gi|239741273 PREDICTED: hypothetical protein XP_002342153 [Homo ... 122 5e-29
gi|239752891 PREDICTED: hypothetical protein [Homo sapiens] 122 6e-29
gi|169161055 PREDICTED: hypothetical protein [Homo sapiens] 122 6e-29
gi|239749576 PREDICTED: hypothetical protein XP_002347089 [Homo ... 120 2e-28
gi|169161052 PREDICTED: hypothetical protein [Homo sapiens] 120 3e-28
gi|169161059 PREDICTED: hypothetical protein [Homo sapiens] 115 8e-27
gi|122937472 bicaudal C homolog 1 [Homo sapiens] 31 0.25
gi|25777744 hypothetical protein LOC267004 [Homo sapiens] 26 6.1
gi|53832007 calcium channel, voltage-dependent, L type, alpha 1F... 26 6.1
gi|154707916 glutathione S-transferase, C-terminal domain contai... 26 6.1
gi|149588660 glutathione S-transferase, C-terminal domain contai... 26 6.1
>gi|239747784 PREDICTED: hypothetical protein [Homo sapiens]
Length = 75
Score = 157 bits (398), Expect = 1e-39
Identities = 75/75 (100%), Positives = 75/75 (100%)
Query: 1 MVVLGMQTEEGHQAQQRGLAPPLGETQVMCKVVGRPSSAGFDTSSHLLFPATLQGALTHL 60
MVVLGMQTEEGHQAQQRGLAPPLGETQVMCKVVGRPSSAGFDTSSHLLFPATLQGALTHL
Sbjct: 1 MVVLGMQTEEGHQAQQRGLAPPLGETQVMCKVVGRPSSAGFDTSSHLLFPATLQGALTHL 60
Query: 61 LCRWRQGDSTDKPPA 75
LCRWRQGDSTDKPPA
Sbjct: 61 LCRWRQGDSTDKPPA 75
>gi|169163288 PREDICTED: hypothetical protein [Homo sapiens]
Length = 75
Score = 157 bits (398), Expect = 1e-39
Identities = 75/75 (100%), Positives = 75/75 (100%)
Query: 1 MVVLGMQTEEGHQAQQRGLAPPLGETQVMCKVVGRPSSAGFDTSSHLLFPATLQGALTHL 60
MVVLGMQTEEGHQAQQRGLAPPLGETQVMCKVVGRPSSAGFDTSSHLLFPATLQGALTHL
Sbjct: 1 MVVLGMQTEEGHQAQQRGLAPPLGETQVMCKVVGRPSSAGFDTSSHLLFPATLQGALTHL 60
Query: 61 LCRWRQGDSTDKPPA 75
LCRWRQGDSTDKPPA
Sbjct: 61 LCRWRQGDSTDKPPA 75
>gi|169174738 PREDICTED: hypothetical protein [Homo sapiens]
Length = 75
Score = 144 bits (364), Expect = 1e-35
Identities = 69/75 (92%), Positives = 70/75 (93%)
Query: 1 MVVLGMQTEEGHQAQQRGLAPPLGETQVMCKVVGRPSSAGFDTSSHLLFPATLQGALTHL 60
MVVLGMQ EEGHQAQQRGLAPPLG TQVMCKVVG PS AGF+TSSHLLFPATLQGALTHL
Sbjct: 1 MVVLGMQREEGHQAQQRGLAPPLGRTQVMCKVVGLPSGAGFNTSSHLLFPATLQGALTHL 60
Query: 61 LCRWRQGDSTDKPPA 75
CRWRQGDSTDKPPA
Sbjct: 61 PCRWRQGDSTDKPPA 75
>gi|239743760 PREDICTED: hypothetical protein XP_002342953 [Homo
sapiens]
Length = 75
Score = 144 bits (364), Expect = 1e-35
Identities = 69/75 (92%), Positives = 70/75 (93%)
Query: 1 MVVLGMQTEEGHQAQQRGLAPPLGETQVMCKVVGRPSSAGFDTSSHLLFPATLQGALTHL 60
MVVLGMQ EEGHQAQQRGLAPPLG TQVMCKVVG PS AGF+TSSHLLFPATLQGALTHL
Sbjct: 1 MVVLGMQREEGHQAQQRGLAPPLGRTQVMCKVVGLPSGAGFNTSSHLLFPATLQGALTHL 60
Query: 61 LCRWRQGDSTDKPPA 75
CRWRQGDSTDKPPA
Sbjct: 61 PCRWRQGDSTDKPPA 75
>gi|239758099 PREDICTED: hypothetical protein XP_002346294 [Homo
sapiens]
Length = 75
Score = 125 bits (314), Expect = 7e-30
Identities = 62/75 (82%), Positives = 64/75 (85%)
Query: 1 MVVLGMQTEEGHQAQQRGLAPPLGETQVMCKVVGRPSSAGFDTSSHLLFPATLQGALTHL 60
MVVLGMQTEEGH RGLAP LG TQV+CKVVG PSS GF+TSSHLLFPATLQ ALTHL
Sbjct: 1 MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQVALTHL 60
Query: 61 LCRWRQGDSTDKPPA 75
CRWRQG STDKPPA
Sbjct: 61 PCRWRQGGSTDKPPA 75
>gi|169178848 PREDICTED: hypothetical protein [Homo sapiens]
Length = 75
Score = 125 bits (314), Expect = 7e-30
Identities = 62/75 (82%), Positives = 64/75 (85%)
Query: 1 MVVLGMQTEEGHQAQQRGLAPPLGETQVMCKVVGRPSSAGFDTSSHLLFPATLQGALTHL 60
MVVLGMQTEEGH RGLAP LG TQV+CKVVG PSS GF+TSSHLLFPATLQ ALTHL
Sbjct: 1 MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQVALTHL 60
Query: 61 LCRWRQGDSTDKPPA 75
CRWRQG STDKPPA
Sbjct: 61 PCRWRQGGSTDKPPA 75
>gi|169215257 PREDICTED: hypothetical protein [Homo sapiens]
Length = 75
Score = 122 bits (307), Expect = 5e-29
Identities = 60/75 (80%), Positives = 62/75 (82%)
Query: 1 MVVLGMQTEEGHQAQQRGLAPPLGETQVMCKVVGRPSSAGFDTSSHLLFPATLQGALTHL 60
MVVLGMQTEEGH RGLAP LG TQV+CKVVG PSS GF+TSSHLLFPATLQGA TH
Sbjct: 1 MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHF 60
Query: 61 LCRWRQGDSTDKPPA 75
CRWRQG STD PPA
Sbjct: 61 PCRWRQGGSTDNPPA 75
>gi|239741273 PREDICTED: hypothetical protein XP_002342153 [Homo
sapiens]
Length = 75
Score = 122 bits (307), Expect = 5e-29
Identities = 60/75 (80%), Positives = 62/75 (82%)
Query: 1 MVVLGMQTEEGHQAQQRGLAPPLGETQVMCKVVGRPSSAGFDTSSHLLFPATLQGALTHL 60
MVVLGMQTEEGH RGLAP LG TQV+CKVVG PSS GF+TSSHLLFPATLQGA TH
Sbjct: 1 MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHF 60
Query: 61 LCRWRQGDSTDKPPA 75
CRWRQG STD PPA
Sbjct: 61 PCRWRQGGSTDNPPA 75
>gi|239752891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 75
Score = 122 bits (306), Expect = 6e-29
Identities = 60/75 (80%), Positives = 62/75 (82%)
Query: 1 MVVLGMQTEEGHQAQQRGLAPPLGETQVMCKVVGRPSSAGFDTSSHLLFPATLQGALTHL 60
MVVLGMQTEEGH RGLAP LG TQV+CKVVG PSS GF+TSSHLLFPATLQGA TH
Sbjct: 1 MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHF 60
Query: 61 LCRWRQGDSTDKPPA 75
CRWRQG STD PPA
Sbjct: 61 PCRWRQGASTDNPPA 75
>gi|169161055 PREDICTED: hypothetical protein [Homo sapiens]
Length = 75
Score = 122 bits (306), Expect = 6e-29
Identities = 60/75 (80%), Positives = 62/75 (82%)
Query: 1 MVVLGMQTEEGHQAQQRGLAPPLGETQVMCKVVGRPSSAGFDTSSHLLFPATLQGALTHL 60
MVVLGMQTEEGH RGLAP LG TQV+CKVVG PSS GF+TSSHLLFPATLQGA TH
Sbjct: 1 MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHF 60
Query: 61 LCRWRQGDSTDKPPA 75
CRWRQG STD PPA
Sbjct: 61 PCRWRQGASTDNPPA 75
>gi|239749576 PREDICTED: hypothetical protein XP_002347089 [Homo
sapiens]
Length = 375
Score = 120 bits (302), Expect = 2e-28
Identities = 60/74 (81%), Positives = 65/74 (87%)
Query: 2 VVLGMQTEEGHQAQQRGLAPPLGETQVMCKVVGRPSSAGFDTSSHLLFPATLQGALTHLL 61
VVLGMQTEEG +A+QRGLAP LG TQV+CKV G PSSA F+TSSH+LFP TLQGALTHL
Sbjct: 302 VVLGMQTEEGCRAEQRGLAPFLGGTQVLCKVGGLPSSAEFNTSSHVLFPGTLQGALTHLP 361
Query: 62 CRWRQGDSTDKPPA 75
RWRQGDSTDKPPA
Sbjct: 362 YRWRQGDSTDKPPA 375
>gi|169161052 PREDICTED: hypothetical protein [Homo sapiens]
Length = 75
Score = 120 bits (300), Expect = 3e-28
Identities = 58/75 (77%), Positives = 62/75 (82%)
Query: 1 MVVLGMQTEEGHQAQQRGLAPPLGETQVMCKVVGRPSSAGFDTSSHLLFPATLQGALTHL 60
MVVLGM+TEEGH RGLAP LG TQV+CKV+G PSS GF+TSSHLLFPATLQGA TH
Sbjct: 1 MVVLGMRTEEGHCIMLRGLAPSLGGTQVICKVLGLPSSIGFNTSSHLLFPATLQGAPTHF 60
Query: 61 LCRWRQGDSTDKPPA 75
CRWRQG STD PPA
Sbjct: 61 PCRWRQGGSTDNPPA 75
>gi|169161059 PREDICTED: hypothetical protein [Homo sapiens]
Length = 75
Score = 115 bits (288), Expect = 8e-27
Identities = 58/75 (77%), Positives = 60/75 (80%)
Query: 1 MVVLGMQTEEGHQAQQRGLAPPLGETQVMCKVVGRPSSAGFDTSSHLLFPATLQGALTHL 60
MVVLGMQTEEGH RGLA LG TQV+CKVVG PSS GF+TSSHLLFPATLQGA TH
Sbjct: 1 MVVLGMQTEEGHCIMLRGLAHSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHF 60
Query: 61 LCRWRQGDSTDKPPA 75
CRWRQG STD PA
Sbjct: 61 PCRWRQGGSTDNLPA 75
>gi|122937472 bicaudal C homolog 1 [Homo sapiens]
Length = 974
Score = 30.8 bits (68), Expect = 0.25
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 9/42 (21%)
Query: 20 APPLGETQVMCKVVGRPSSAGFDTSSHLLFPATLQGALTHLL 61
APPL T S+ GF HL+ P+T Q LT++L
Sbjct: 499 APPLANTS---------SATGFSAIPHLMIPSTAQATLTNIL 531
>gi|25777744 hypothetical protein LOC267004 [Homo sapiens]
Length = 593
Score = 26.2 bits (56), Expect = 6.1
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 50 PATLQGALTHLLCRWRQGDSTDKPPA 75
P + + +T +LC+W++ D T +P A
Sbjct: 100 PPSRRRKMTKILCKWKKADLTVQPVA 125
>gi|53832007 calcium channel, voltage-dependent, L type, alpha 1F
subunit [Homo sapiens]
Length = 1977
Score = 26.2 bits (56), Expect = 6.1
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 5/72 (6%)
Query: 4 LGMQTEEGHQAQQRGLAPPLGETQVMCKVVGRPSSAGFDTSSHLLFPATLQGALTHLLCR 63
LG EEG + LA + + + + TSSH PA+ G++T
Sbjct: 425 LGSMAEEGRAGHRPQLAELTNRRRGRLRWFSHSTRSTHSTSSHASLPASDTGSMTE---- 480
Query: 64 WRQGDSTDKPPA 75
QGD ++ A
Sbjct: 481 -TQGDEDEEEGA 491
>gi|154707916 glutathione S-transferase, C-terminal domain
containing isoform 2 [Homo sapiens]
Length = 546
Score = 26.2 bits (56), Expect = 6.1
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 17/75 (22%)
Query: 13 QAQQRGLAPPLGETQVMCKVVGRPSSAGFDTSSHLL-------------FPATLQGALTH 59
Q + G+ PPL + + KV + +S G D+SS L PAT +H
Sbjct: 115 QQKADGVGPPLTKGKAKSKVHTQETSEGLDSSSKSLELKVAFSKLTVQEEPATTNREPSH 174
Query: 60 LLCRWRQGDSTDKPP 74
+ R+ ++D PP
Sbjct: 175 I----RKAKASDLPP 185
>gi|149588660 glutathione S-transferase, C-terminal domain
containing isoform 1 [Homo sapiens]
Length = 633
Score = 26.2 bits (56), Expect = 6.1
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 17/75 (22%)
Query: 13 QAQQRGLAPPLGETQVMCKVVGRPSSAGFDTSSHLL-------------FPATLQGALTH 59
Q + G+ PPL + + KV + +S G D+SS L PAT +H
Sbjct: 202 QQKADGVGPPLTKGKAKSKVHTQETSEGLDSSSKSLELKVAFSKLTVQEEPATTNREPSH 261
Query: 60 LLCRWRQGDSTDKPP 74
+ R+ ++D PP
Sbjct: 262 I----RKAKASDLPP 272
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,410,468
Number of Sequences: 37866
Number of extensions: 128623
Number of successful extensions: 263
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 248
Number of HSP's gapped (non-prelim): 18
length of query: 75
length of database: 18,247,518
effective HSP length: 47
effective length of query: 28
effective length of database: 16,467,816
effective search space: 461098848
effective search space used: 461098848
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.