Search of human proteins with 117414139

Search of human proteins with 117414139

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|117414139 glutamic-oxaloacetic transaminase 1-like 1 [Homo
sapiens]
         (421 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|117414139 glutamic-oxaloacetic transaminase 1-like 1 [Homo sa...   855   0.0  
gi|4504067 aspartate aminotransferase 1 [Homo sapiens]                309   4e-84
gi|73486658 aspartate aminotransferase 2 precursor [Homo sapiens]     200   2e-51
gi|27501458 CTF18, chromosome transmission fidelity factor 18 ho...    30   4.1  

>gi|117414139 glutamic-oxaloacetic transaminase 1-like 1 [Homo
           sapiens]
          Length = 421

 Score =  855 bits (2208), Expect = 0.0
 Identities = 421/421 (100%), Positives = 421/421 (100%)

Query: 1   MPTLSVFMDVPLAHKLEGSLLKTYKQDDYPNKIFLAYRVCMTNEGHPWVSLVVQKTRLQI 60
           MPTLSVFMDVPLAHKLEGSLLKTYKQDDYPNKIFLAYRVCMTNEGHPWVSLVVQKTRLQI
Sbjct: 1   MPTLSVFMDVPLAHKLEGSLLKTYKQDDYPNKIFLAYRVCMTNEGHPWVSLVVQKTRLQI 60

Query: 61  SQDPSLNYEYLPTMGLKSFIQASLALLFGKHSQAIVENRVGGVHTVGDSGAFQLGVQFLR 120
           SQDPSLNYEYLPTMGLKSFIQASLALLFGKHSQAIVENRVGGVHTVGDSGAFQLGVQFLR
Sbjct: 61  SQDPSLNYEYLPTMGLKSFIQASLALLFGKHSQAIVENRVGGVHTVGDSGAFQLGVQFLR 120

Query: 121 AWHKDARIVYIISSQKELHGLVFQDMGFTVYEYSVWDPKKLCMDPDILLNVVEQIPHGCV 180
           AWHKDARIVYIISSQKELHGLVFQDMGFTVYEYSVWDPKKLCMDPDILLNVVEQIPHGCV
Sbjct: 121 AWHKDARIVYIISSQKELHGLVFQDMGFTVYEYSVWDPKKLCMDPDILLNVVEQIPHGCV 180

Query: 181 LVMGNIIDCKLTPSGWAKLMSMIKSKQIFPFFDIPCQGLYTSDLEEDTRILQYFVSQGFE 240
           LVMGNIIDCKLTPSGWAKLMSMIKSKQIFPFFDIPCQGLYTSDLEEDTRILQYFVSQGFE
Sbjct: 181 LVMGNIIDCKLTPSGWAKLMSMIKSKQIFPFFDIPCQGLYTSDLEEDTRILQYFVSQGFE 240

Query: 241 FFCSQSLSKNFGIYDEGVGMLVVVAVNNQQLLCVLSQLEGLAQALWLNPPNTGARVITSI 300
           FFCSQSLSKNFGIYDEGVGMLVVVAVNNQQLLCVLSQLEGLAQALWLNPPNTGARVITSI
Sbjct: 241 FFCSQSLSKNFGIYDEGVGMLVVVAVNNQQLLCVLSQLEGLAQALWLNPPNTGARVITSI 300

Query: 301 LCNPALLGEWKQSLKEVVENIMLTKEKVKEKLQLLGTPGSWGHITEQSGTHGYLGLNSQQ 360
           LCNPALLGEWKQSLKEVVENIMLTKEKVKEKLQLLGTPGSWGHITEQSGTHGYLGLNSQQ
Sbjct: 301 LCNPALLGEWKQSLKEVVENIMLTKEKVKEKLQLLGTPGSWGHITEQSGTHGYLGLNSQQ 360

Query: 361 VEYLVRKKHIYIPKNGQINFSCINANNINYITEGINEAVLLTESSEMCLPKEKKTLIGIK 420
           VEYLVRKKHIYIPKNGQINFSCINANNINYITEGINEAVLLTESSEMCLPKEKKTLIGIK
Sbjct: 361 VEYLVRKKHIYIPKNGQINFSCINANNINYITEGINEAVLLTESSEMCLPKEKKTLIGIK 420

Query: 421 L 421
           L
Sbjct: 421 L 421


>gi|4504067 aspartate aminotransferase 1 [Homo sapiens]
          Length = 413

 Score =  309 bits (791), Expect = 4e-84
 Identities = 164/405 (40%), Positives = 237/405 (58%), Gaps = 10/405 (2%)

Query: 5   SVFMDVPLAHK-LEGSLLKTYKQDDYPNKIFLAYRVCMTNEGHPWVSLVVQKTRLQISQD 63
           SVF +VP A   L   L   +++D  P K+ L      T++ HPWV  VV+K   +I+ D
Sbjct: 5   SVFAEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIAND 64

Query: 64  PSLNYEYLPTMGLKSFIQASLALLFGKHSQAIVENRVGGVHTVGDSGAFQLGVQFLRAWH 123
            SLN+EYLP +GL  F   +  L  G  S A+ E RVGGV ++G +GA ++G  FL  W+
Sbjct: 65  NSLNHEYLPILGLAEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWY 124

Query: 124 KDARI----VYIISSQKELHGLVFQDMGFT-VYEYSVWDPKKLCMDPDILLNVVEQIPHG 178
                    VY+ S   E H  VF   GF  +  Y  WD +K  +D    LN +E  P  
Sbjct: 125 NGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEF 184

Query: 179 CVLVMG----NIIDCKLTPSGWAKLMSMIKSKQIFPFFDIPCQGLYTSDLEEDTRILQYF 234
            ++V+     N      TP  W ++ S++K + +FPFFD   QG  + +LE D   ++YF
Sbjct: 185 SIVVLHACAHNPTGIDPTPEQWKQIASVMKHRFLFPFFDSAYQGFASGNLERDAWAIRYF 244

Query: 235 VSQGFEFFCSQSLSKNFGIYDEGVGMLVVVAVNNQQLLCVLSQLEGLAQALWLNPPNTGA 294
           VS+GFEFFC+QS SKNFG+Y+E VG L VV    + +L VLSQ+E + +  W NPP  GA
Sbjct: 245 VSEGFEFFCAQSFSKNFGLYNERVGNLTVVGKEPESILQVLSQMEKIVRITWSNPPAQGA 304

Query: 295 RVITSILCNPALLGEWKQSLKEVVENIMLTKEKVKEKLQLLGTPGSWGHITEQSGTHGYL 354
           R++ S L NP L  EW  ++K + + I+  + +++ +L+ L TPG+W HIT+Q G   + 
Sbjct: 305 RIVASTLSNPELFEEWTGNVKTMADRILTMRSELRARLEALKTPGTWNHITDQIGMFSFT 364

Query: 355 GLNSQQVEYLVRKKHIYIPKNGQINFSCINANNINYITEGINEAV 399
           GLN +QVEYLV +KHIY+  +G+IN S +   N++Y+   I+EAV
Sbjct: 365 GLNPKQVEYLVNEKHIYLLPSGRINVSGLTTKNLDYVATSIHEAV 409


>gi|73486658 aspartate aminotransferase 2 precursor [Homo sapiens]
          Length = 430

 Score =  200 bits (508), Expect = 2e-51
 Identities = 115/383 (30%), Positives = 204/383 (53%), Gaps = 11/383 (2%)

Query: 22  KTYKQDDYPNKIFLAYRVCMTNEGHPWVSLVVQKTRLQISQDPSLNYEYLPTMGLKSFIQ 81
           + +K+D    K+ L       + G P+V   V+K   QI+   +L+ EYLP  GL  F +
Sbjct: 49  EAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAK-NLDKEYLPIGGLAEFCK 107

Query: 82  ASLALLFGKHSQAIVENRVGGVHTVGDSGAFQLGVQFLRAWHKDARIVYIISSQKELHGL 141
           AS  L  G++S+ +   R   V T+  +GA ++G  FL+ + K +R V++       H  
Sbjct: 108 ASAELALGENSEVLKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPTWGNHTP 167

Query: 142 VFQDMGFTVYEYSVWDPKKLCMDPDILLNVVEQIPHGCVLVMGNIIDCKLTPSG------ 195
           +F+D G  +  Y  +DPK    D    +  + +IP   VL++     C   P+G      
Sbjct: 168 IFRDAGMQLQGYRYYDPKTCGFDFTGAVEDISKIPEQSVLLLHA---CAHNPTGVDPRPE 224

Query: 196 -WAKLMSMIKSKQIFPFFDIPCQGLYTSDLEEDTRILQYFVSQGFEFFCSQSLSKNFGIY 254
            W ++ +++K + +F FFD+  QG  + D ++D   +++F+ QG      QS +KN G+Y
Sbjct: 225 QWKEIATVVKKRNLFAFFDMAYQGFASGDGDKDAWAVRHFIEQGINVCLCQSYAKNMGLY 284

Query: 255 DEGVGMLVVVAVNNQQLLCVLSQLEGLAQALWLNPPNTGARVITSILCNPALLGEWKQSL 314
            E VG   +V  +  +   V SQL+ L + ++ NPP  GAR+  +IL  P L  +W Q +
Sbjct: 285 GERVGAFTMVCKDADEAKRVESQLKILIRPMYSNPPLNGARIAAAILNTPDLRKQWLQEV 344

Query: 315 KEVVENIMLTKEKVKEKLQLLGTPGSWGHITEQSGTHGYLGLNSQQVEYLVRKKHIYIPK 374
           K + + I+  + ++   L+  G+  +W HIT+Q G   + GL  +QVE L+++  IY+ K
Sbjct: 345 KVMADRIIGMRTQLVSNLKKEGSTHNWQHITDQIGMFCFTGLKPEQVERLIKEFSIYMTK 404

Query: 375 NGQINFSCINANNINYITEGINE 397
           +G+I+ + + ++N+ Y+   I++
Sbjct: 405 DGRISVAGVTSSNVGYLAHAIHQ 427


>gi|27501458 CTF18, chromosome transmission fidelity factor 18
           homolog [Homo sapiens]
          Length = 975

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 25/124 (20%), Positives = 51/124 (41%), Gaps = 5/124 (4%)

Query: 289 PPNTGARVITSILCNPALLGEWKQSLKEVVENIMLTKEKVKEKLQLLGTPG---SWGHIT 345
           PP++    IT       L   W   + E   ++ LT+     +  +L  P     + H+T
Sbjct: 122 PPDSSPTDITPPPSPEDLAELWGHGVSEAAADVGLTRASPAARNPVLRRPPILEDYVHVT 181

Query: 346 EQSGTHGYLGLNSQQVEYLVRKKHIYIP--KNGQINFSCINANNINYITEGINEAVLLTE 403
              G   YL L +  +   V+   +++P    GQ++   ++  ++    +G     LL E
Sbjct: 182 STEGVRAYLVLRADPMAPGVQGSLLHVPWRGGGQLDLLGVSLASLKKQVDGERRERLLQE 241

Query: 404 SSEM 407
           + ++
Sbjct: 242 AQKL 245


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.138    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,644,368
Number of Sequences: 37866
Number of extensions: 663830
Number of successful extensions: 1277
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1271
Number of HSP's gapped (non-prelim): 4
length of query: 421
length of database: 18,247,518
effective HSP length: 105
effective length of query: 316
effective length of database: 14,271,588
effective search space: 4509821808
effective search space used: 4509821808
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.