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Search of human proteins with 239582769
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239582769 hedgehog acyltransferase-like [Homo sapiens]
(504 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239582769 hedgehog acyltransferase-like [Homo sapiens] 1031 0.0
gi|170784861 hedgehog acyltransferase [Homo sapiens] 182 6e-46
gi|170784863 hedgehog acyltransferase [Homo sapiens] 182 6e-46
gi|46409316 zinc finger, DHHC-type containing 24 [Homo sapiens] 31 3.0
>gi|239582769 hedgehog acyltransferase-like [Homo sapiens]
Length = 504
Score = 1031 bits (2665), Expect = 0.0
Identities = 504/504 (100%), Positives = 504/504 (100%)
Query: 1 MGIKTALPAAELGLYSLVLSGALAYAGRGLLEASQDGAHRKAFRESVRPGWEYIGRKMDV 60
MGIKTALPAAELGLYSLVLSGALAYAGRGLLEASQDGAHRKAFRESVRPGWEYIGRKMDV
Sbjct: 1 MGIKTALPAAELGLYSLVLSGALAYAGRGLLEASQDGAHRKAFRESVRPGWEYIGRKMDV 60
Query: 61 ADFEWVMWFTSFRNVIIFALSGHVLFAKLCTMVAPKLRSWMYAVYGALAVMGTMGPWYLL 120
ADFEWVMWFTSFRNVIIFALSGHVLFAKLCTMVAPKLRSWMYAVYGALAVMGTMGPWYLL
Sbjct: 61 ADFEWVMWFTSFRNVIIFALSGHVLFAKLCTMVAPKLRSWMYAVYGALAVMGTMGPWYLL 120
Query: 121 LLLGHCVGLYVASLLGQPWLCLGLGLASLASFKMDPLISWQSGFVTGTFDLQEVLFHGGS 180
LLLGHCVGLYVASLLGQPWLCLGLGLASLASFKMDPLISWQSGFVTGTFDLQEVLFHGGS
Sbjct: 121 LLLGHCVGLYVASLLGQPWLCLGLGLASLASFKMDPLISWQSGFVTGTFDLQEVLFHGGS 180
Query: 181 SFTVLRCTSFALESCAHPDRHYSLADLLKYNFYLPFFFFGPIMTFDRFHAQVSQVEPVRR 240
SFTVLRCTSFALESCAHPDRHYSLADLLKYNFYLPFFFFGPIMTFDRFHAQVSQVEPVRR
Sbjct: 181 SFTVLRCTSFALESCAHPDRHYSLADLLKYNFYLPFFFFGPIMTFDRFHAQVSQVEPVRR 240
Query: 241 EGELWHIRAQAGLSVVAIMAVDIFFHFFYILTIPSDLKFANRLPDSALAGLAYSNLVYDW 300
EGELWHIRAQAGLSVVAIMAVDIFFHFFYILTIPSDLKFANRLPDSALAGLAYSNLVYDW
Sbjct: 241 EGELWHIRAQAGLSVVAIMAVDIFFHFFYILTIPSDLKFANRLPDSALAGLAYSNLVYDW 300
Query: 301 VKAAVLFGVVNTVACLDHLDPPQPPKCITALYVFAETHFDRGINDWLCKYVYNHIGGEHS 360
VKAAVLFGVVNTVACLDHLDPPQPPKCITALYVFAETHFDRGINDWLCKYVYNHIGGEHS
Sbjct: 301 VKAAVLFGVVNTVACLDHLDPPQPPKCITALYVFAETHFDRGINDWLCKYVYNHIGGEHS 360
Query: 361 AVIPELAATVATFAITTLWLGPCDIVYLWSFLNCFGLNFELWMQKLAEWGPLARIEASLS 420
AVIPELAATVATFAITTLWLGPCDIVYLWSFLNCFGLNFELWMQKLAEWGPLARIEASLS
Sbjct: 361 AVIPELAATVATFAITTLWLGPCDIVYLWSFLNCFGLNFELWMQKLAEWGPLARIEASLS 420
Query: 421 VQMSRRVRALFGAMNFWAIIMYNLVSLNSLKFTELVARRLLLTGFPQTTLSILFVTYCGV 480
VQMSRRVRALFGAMNFWAIIMYNLVSLNSLKFTELVARRLLLTGFPQTTLSILFVTYCGV
Sbjct: 421 VQMSRRVRALFGAMNFWAIIMYNLVSLNSLKFTELVARRLLLTGFPQTTLSILFVTYCGV 480
Query: 481 QLVKERERTLALEEEQKQDKEKPE 504
QLVKERERTLALEEEQKQDKEKPE
Sbjct: 481 QLVKERERTLALEEEQKQDKEKPE 504
>gi|170784861 hedgehog acyltransferase [Homo sapiens]
Length = 493
Score = 182 bits (462), Expect = 6e-46
Identities = 139/487 (28%), Positives = 225/487 (46%), Gaps = 25/487 (5%)
Query: 7 LPAAELGLYSLVLSGALAYAGRGLLEASQDGAHRKAFRESVRPGWEYIGRKMDVADFEWV 66
LP EL LY L G Y+ + + S++ + + G K D DFEW
Sbjct: 2 LPRWELALYLLASLGFHFYSFYEVYKVSREHEEELDQEFELETDTLFGGLKKDATDFEWS 61
Query: 67 MWFTSFRNVIIFALSGHVLFAKLCTMVAPKLRSWMYAVYGALA---VMGTMGPWYLLL-- 121
W + +++ L GH++ +++ T++A K R W+ +YG A V+GT G +LL
Sbjct: 62 FWMEWGKQWLVWLLLGHMVVSQMATLLARKHRPWILMLYGMWACWCVLGTPGVAMVLLHT 121
Query: 122 LLGHCVGLYVASLLGQPWLCLGLGLASLASFKMDPLISWQSGFVTGTFDLQEVLFHGGSS 181
+ CV + + LL WLC L L++L ++ + + LQ L
Sbjct: 122 TISFCVAQFRSQLL--TWLCSLLLLSTLRLQGVEEVKRRWYKTENEYYLLQFTL------ 173
Query: 182 FTVLRC---TSFALESCAHP----DRHYSLADLLKYNFYLPFFFFGPIMTFDRFHAQVSQ 234
+RC TSF+LE C YS +L Y FY P GPI++F F Q+ Q
Sbjct: 174 --TVRCLYYTSFSLELCWQQLPAASTSYSFPWMLAYVFYYPVLHNGPILSFSEFIKQMQQ 231
Query: 235 VEPVRREGELWHIRAQAGLSVVAIMAVDIFFHFFYILTIPSDLKFANRLPDSALAGLAYS 294
E + L + G + ++ H Y+ I S + + L GLA +
Sbjct: 232 QEHDSLKASLCVLALGLGRLLCWWWLAELMAHLMYMHAIYSSIPLLETVSCWTLGGLALA 291
Query: 295 NLVYDWVKAAVLFGVVNTVACLDHLDPPQPPKCITALYVFAET--HFDRGINDWLCKYVY 352
+++ +VK VLFGV + LD L PP P+C++ ++ F +FD G++++L +YVY
Sbjct: 292 QVLFFYVKYLVLFGVPALLMRLDGLTPPALPRCVSTMFSFTGMWRYFDVGLHNFLIRYVY 351
Query: 353 NHIGGEHSAVIPELAATVATFAITTLWLGPCDIVYLWSFLNCFGLNFELWMQKLAEWGPL 412
+GG ++ L +T TFA + W G D ++ W+ LN G+ E +++L E +
Sbjct: 352 IPVGGSQHGLLGTLFSTAMTFAFVSYWHGGYDYLWCWAALNWLGVTVENGVRRLVETPCI 411
Query: 413 A-RIEASLSVQMSRRVRALFGAMNFWAIIMYNLVSLNSLKFTELVARRLLLTGFPQTTLS 471
+ S Q RR A + + +I+ NLV L + + R+ + G+P TLS
Sbjct: 412 QDSLARYFSPQARRRFHAALASCSTSMLILSNLVFLGGNEVGKTYWNRIFIQGWPWVTLS 471
Query: 472 ILFVTYC 478
+L YC
Sbjct: 472 VLGFLYC 478
>gi|170784863 hedgehog acyltransferase [Homo sapiens]
Length = 493
Score = 182 bits (462), Expect = 6e-46
Identities = 139/487 (28%), Positives = 225/487 (46%), Gaps = 25/487 (5%)
Query: 7 LPAAELGLYSLVLSGALAYAGRGLLEASQDGAHRKAFRESVRPGWEYIGRKMDVADFEWV 66
LP EL LY L G Y+ + + S++ + + G K D DFEW
Sbjct: 2 LPRWELALYLLASLGFHFYSFYEVYKVSREHEEELDQEFELETDTLFGGLKKDATDFEWS 61
Query: 67 MWFTSFRNVIIFALSGHVLFAKLCTMVAPKLRSWMYAVYGALA---VMGTMGPWYLLL-- 121
W + +++ L GH++ +++ T++A K R W+ +YG A V+GT G +LL
Sbjct: 62 FWMEWGKQWLVWLLLGHMVVSQMATLLARKHRPWILMLYGMWACWCVLGTPGVAMVLLHT 121
Query: 122 LLGHCVGLYVASLLGQPWLCLGLGLASLASFKMDPLISWQSGFVTGTFDLQEVLFHGGSS 181
+ CV + + LL WLC L L++L ++ + + LQ L
Sbjct: 122 TISFCVAQFRSQLL--TWLCSLLLLSTLRLQGVEEVKRRWYKTENEYYLLQFTL------ 173
Query: 182 FTVLRC---TSFALESCAHP----DRHYSLADLLKYNFYLPFFFFGPIMTFDRFHAQVSQ 234
+RC TSF+LE C YS +L Y FY P GPI++F F Q+ Q
Sbjct: 174 --TVRCLYYTSFSLELCWQQLPAASTSYSFPWMLAYVFYYPVLHNGPILSFSEFIKQMQQ 231
Query: 235 VEPVRREGELWHIRAQAGLSVVAIMAVDIFFHFFYILTIPSDLKFANRLPDSALAGLAYS 294
E + L + G + ++ H Y+ I S + + L GLA +
Sbjct: 232 QEHDSLKASLCVLALGLGRLLCWWWLAELMAHLMYMHAIYSSIPLLETVSCWTLGGLALA 291
Query: 295 NLVYDWVKAAVLFGVVNTVACLDHLDPPQPPKCITALYVFAET--HFDRGINDWLCKYVY 352
+++ +VK VLFGV + LD L PP P+C++ ++ F +FD G++++L +YVY
Sbjct: 292 QVLFFYVKYLVLFGVPALLMRLDGLTPPALPRCVSTMFSFTGMWRYFDVGLHNFLIRYVY 351
Query: 353 NHIGGEHSAVIPELAATVATFAITTLWLGPCDIVYLWSFLNCFGLNFELWMQKLAEWGPL 412
+GG ++ L +T TFA + W G D ++ W+ LN G+ E +++L E +
Sbjct: 352 IPVGGSQHGLLGTLFSTAMTFAFVSYWHGGYDYLWCWAALNWLGVTVENGVRRLVETPCI 411
Query: 413 A-RIEASLSVQMSRRVRALFGAMNFWAIIMYNLVSLNSLKFTELVARRLLLTGFPQTTLS 471
+ S Q RR A + + +I+ NLV L + + R+ + G+P TLS
Sbjct: 412 QDSLARYFSPQARRRFHAALASCSTSMLILSNLVFLGGNEVGKTYWNRIFIQGWPWVTLS 471
Query: 472 ILFVTYC 478
+L YC
Sbjct: 472 VLGFLYC 478
>gi|46409316 zinc finger, DHHC-type containing 24 [Homo sapiens]
Length = 284
Score = 30.8 bits (68), Expect = 3.0
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 95 PKLRSWMYAVYGALAVMGTMGPWYLLLLLGHCVGLYVASLLGQPWLCLGLGLASLASFKM 154
P L ++A L V +GP LL H L++A+LL PWL L G SLA F +
Sbjct: 138 PFLCLLLHAAGVLLHVSVLLGPALSALLRAH-TPLHMAALLLLPWLMLLTGRVSLAQFAL 196
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.328 0.140 0.453
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,391,426
Number of Sequences: 37866
Number of extensions: 766263
Number of successful extensions: 2236
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2221
Number of HSP's gapped (non-prelim): 4
length of query: 504
length of database: 18,247,518
effective HSP length: 107
effective length of query: 397
effective length of database: 14,195,856
effective search space: 5635754832
effective search space used: 5635754832
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.