Search of human proteins with 221139836

Search of human proteins with 221139836

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|221139836 hypothetical protein LOC84830 isoform 1 [Homo
sapiens]
         (248 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|221139836 hypothetical protein LOC84830 isoform 1 [Homo sapiens]   510   e-145
gi|14249372 hypothetical protein LOC84830 isoform 2 [Homo sapiens]    462   e-130
gi|40316941 androgen-induced 1 [Homo sapiens]                         150   1e-36
gi|8659559 transmembrane protein 50B [Homo sapiens]                    35   0.061
gi|22907060 solute carrier family 47, member 1 [Homo sapiens]          32   0.67 
gi|168823435 hypothetical protein LOC79747 [Homo sapiens]              31   1.1  
gi|226371746 peptide transporter 2 isoform a [Homo sapiens]            29   4.3  
gi|222080083 guanylate cyclase 2C [Homo sapiens]                       28   9.7  
gi|189083762 gamma-aminobutyric acid A receptor, gamma 2 isoform...    28   9.7  
gi|38788135 gamma-aminobutyric acid A receptor, gamma 2 isoform ...    28   9.7  
gi|38788155 gamma-aminobutyric acid A receptor, gamma 2 isoform ...    28   9.7  
gi|41152093 zinc finger protein 644 isoform 1 [Homo sapiens]           28   9.7  

>gi|221139836 hypothetical protein LOC84830 isoform 1 [Homo sapiens]
          Length = 248

 Score =  510 bits (1313), Expect = e-145
 Identities = 248/248 (100%), Positives = 248/248 (100%)

Query: 1   MTKTSTCIYHFLVLSWYTFLNYYISQEGKDEVKPKILANGARWKYMTLLNLLKNRTAGFD 60
           MTKTSTCIYHFLVLSWYTFLNYYISQEGKDEVKPKILANGARWKYMTLLNLLKNRTAGFD
Sbjct: 1   MTKTSTCIYHFLVLSWYTFLNYYISQEGKDEVKPKILANGARWKYMTLLNLLKNRTAGFD 60

Query: 61  IYQPGSFRQLLQTIFYGVTCLDDVLKRTKGGKDIKFLTAFRDLLFTTLAFPVSTFVFLAF 120
           IYQPGSFRQLLQTIFYGVTCLDDVLKRTKGGKDIKFLTAFRDLLFTTLAFPVSTFVFLAF
Sbjct: 61  IYQPGSFRQLLQTIFYGVTCLDDVLKRTKGGKDIKFLTAFRDLLFTTLAFPVSTFVFLAF 120

Query: 121 WILFLYNRDLIYPKVLDTVIPVWLNHAMHTFIFPITLAEVVLRPHSYPSKKTGLTLLAAA 180
           WILFLYNRDLIYPKVLDTVIPVWLNHAMHTFIFPITLAEVVLRPHSYPSKKTGLTLLAAA
Sbjct: 121 WILFLYNRDLIYPKVLDTVIPVWLNHAMHTFIFPITLAEVVLRPHSYPSKKTGLTLLAAA 180

Query: 181 SIAYISRILWLYFETGTWVYPVFAKLSLLGLAAFFSLSYVFIASIYLLGEKLNHWKWGDM 240
           SIAYISRILWLYFETGTWVYPVFAKLSLLGLAAFFSLSYVFIASIYLLGEKLNHWKWGDM
Sbjct: 181 SIAYISRILWLYFETGTWVYPVFAKLSLLGLAAFFSLSYVFIASIYLLGEKLNHWKWGDM 240

Query: 241 RQPRKKRK 248
           RQPRKKRK
Sbjct: 241 RQPRKKRK 248


>gi|14249372 hypothetical protein LOC84830 isoform 2 [Homo sapiens]
          Length = 230

 Score =  462 bits (1188), Expect = e-130
 Identities = 230/248 (92%), Positives = 230/248 (92%), Gaps = 18/248 (7%)

Query: 1   MTKTSTCIYHFLVLSWYTFLNYYISQEGKDEVKPKILANGARWKYMTLLNLLKNRTAGFD 60
           MTKTSTCIYHFLVLSWYTFLNYYISQEGKDEVKPKILANGARWKYMTLLNLL        
Sbjct: 1   MTKTSTCIYHFLVLSWYTFLNYYISQEGKDEVKPKILANGARWKYMTLLNLL-------- 52

Query: 61  IYQPGSFRQLLQTIFYGVTCLDDVLKRTKGGKDIKFLTAFRDLLFTTLAFPVSTFVFLAF 120
                     LQTIFYGVTCLDDVLKRTKGGKDIKFLTAFRDLLFTTLAFPVSTFVFLAF
Sbjct: 53  ----------LQTIFYGVTCLDDVLKRTKGGKDIKFLTAFRDLLFTTLAFPVSTFVFLAF 102

Query: 121 WILFLYNRDLIYPKVLDTVIPVWLNHAMHTFIFPITLAEVVLRPHSYPSKKTGLTLLAAA 180
           WILFLYNRDLIYPKVLDTVIPVWLNHAMHTFIFPITLAEVVLRPHSYPSKKTGLTLLAAA
Sbjct: 103 WILFLYNRDLIYPKVLDTVIPVWLNHAMHTFIFPITLAEVVLRPHSYPSKKTGLTLLAAA 162

Query: 181 SIAYISRILWLYFETGTWVYPVFAKLSLLGLAAFFSLSYVFIASIYLLGEKLNHWKWGDM 240
           SIAYISRILWLYFETGTWVYPVFAKLSLLGLAAFFSLSYVFIASIYLLGEKLNHWKWGDM
Sbjct: 163 SIAYISRILWLYFETGTWVYPVFAKLSLLGLAAFFSLSYVFIASIYLLGEKLNHWKWGDM 222

Query: 241 RQPRKKRK 248
           RQPRKKRK
Sbjct: 223 RQPRKKRK 230


>gi|40316941 androgen-induced 1 [Homo sapiens]
          Length = 238

 Score =  150 bits (379), Expect = 1e-36
 Identities = 80/244 (32%), Positives = 127/244 (52%), Gaps = 30/244 (12%)

Query: 12  LVLSWYTFLNYYISQEGKDEVKPKILANGARWKYMTLLNLLKNRTAGFDIYQPGSFRQLL 71
           ++LS+ + L  Y + E      P     G  WK++T ++L+                  +
Sbjct: 13  ILLSYCSILCNYKAIE-----MPSHQTYGGSWKFLTFIDLV------------------I 49

Query: 72  QTIFYGVTCLDDV---LKRTKGGKD----IKFLTAFRDLLFTTLAFPVSTFVFLAFWILF 124
           Q +F+G+  L D+   L R  G ++    +K L + RD +   LAFPV  FV   FWI++
Sbjct: 50  QAVFFGICVLTDLSSLLTRGSGNQEQERQLKKLISLRDWMLAVLAFPVGVFVVAVFWIIY 109

Query: 125 LYNRDLIYPKVLDTVIPVWLNHAMHTFIFPITLAEVVLRPHSYPSKKTGLTLLAAASIAY 184
            Y+R++IYPK+LD  IP WLNH MHT + P  L E+    H YPS+ +GLT +   S+ Y
Sbjct: 110 AYDREMIYPKLLDNFIPGWLNHGMHTTVLPFILIEMRTSHHQYPSRSSGLTAICTFSVGY 169

Query: 185 ISRILWLYFETGTWVYPVFAKLSLLGLAAFFSLSYVFIASIYLLGEKLNHWKWGDMRQPR 244
           I  + W++  TG WVYP    +       FF  + + +  +YLLGE LN++ W   +   
Sbjct: 170 ILWVCWVHHVTGMWVYPFLEHIGPGARIIFFGSTTILMNFLYLLGEVLNNYIWDTQKSME 229

Query: 245 KKRK 248
           ++++
Sbjct: 230 EEKE 233


>gi|8659559 transmembrane protein 50B [Homo sapiens]
          Length = 158

 Score = 35.0 bits (79), Expect = 0.061
 Identities = 38/139 (27%), Positives = 54/139 (38%), Gaps = 36/139 (25%)

Query: 117 FLAFWILFLYNRDLIYPKVLDTVIPVWLNHAMHT--------FIFPITLAEVVLRPHSYP 168
           F  +WI+   +  ++YPK      P  LNHA HT        F     ++   +R  SY 
Sbjct: 35  FTGWWIMI--DAAVVYPK------PEQLNHAFHTCGVFSTLAFFMINAVSNAQVRGDSYE 86

Query: 169 SKKTGLT-----------LLAAASIAYISRILWLYFETGTWVYPVFAKLSLLGLAAFFSL 217
           S   G T           L+  + IA +  +   Y    T VYP        GLA FF  
Sbjct: 87  SGCLGRTGARVWLFIGFMLMFGSLIASMWILFGAYVTQNTDVYP--------GLAVFFQN 138

Query: 218 SYVFIAS-IYLLGEKLNHW 235
           + +F ++ IY  G     W
Sbjct: 139 ALIFFSTLIYKFGRTEELW 157


>gi|22907060 solute carrier family 47, member 1 [Homo sapiens]
          Length = 570

 Score = 31.6 bits (70), Expect = 0.67
 Identities = 31/160 (19%), Positives = 72/160 (45%), Gaps = 13/160 (8%)

Query: 82  DDVLKRTKGGKDIKFLTAFRD---LLFTTLAFPVSTFVFLAFWILFLYNRDLIYPKVLDT 138
           D ++ +T G +++K +        L+     FP          IL L+ +D    ++  T
Sbjct: 97  DTLISQTYGSQNLKHVGVILQRSALVLLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQT 156

Query: 139 VIPVWLNHAMHTFIFPITLAEVVLRPHSYPSKKTGLTLLAAASIAYISRILWLYFETGTW 198
            + +++     TF++ + +  ++ +    P   TG+   AA  +  ++  L+L+      
Sbjct: 157 YVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGV---AANLVNALANYLFLH-----Q 208

Query: 199 VYPVFAKLSLLGLAAFFSLSYVFIASIYLLGEKLNHWKWG 238
           ++      +L  L + ++L+ +    +Y+LG+KL+   WG
Sbjct: 209 LHLGVIGSALANLISQYTLALLLF--LYILGKKLHQATWG 246


>gi|168823435 hypothetical protein LOC79747 [Homo sapiens]
          Length = 1667

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 18/118 (15%)

Query: 99   AFRDLLFTTLAFPVSTFVFLAFWILFLYNRDLIYPKVLDTVIPVWLNHAMHTFIF---PI 155
            AF D   T    P +++ F+ F   FL ++D+I    + T +P+ + H ++       P 
Sbjct: 987  AFADYTVTYQEQPPNSW-FIVFRETFLVHQDMILVPKVYTTLPICILHIVNNDTMEQVPK 1045

Query: 156  TLAEVVLRPHSYPSKKTGLTLLAAASIAYISRILWLYFETGTWVYPVFAKLSLLGLAA 213
               +VV  P+ Y   K G T +A A            F   T+V     KL L+G +A
Sbjct: 1046 VFQKVV--PYLYTKNKKGYTFVAEA------------FTGDTYVAASRWKLRLIGSSA 1089


>gi|226371746 peptide transporter 2 isoform a [Homo sapiens]
          Length = 729

 Score = 28.9 bits (63), Expect = 4.3
 Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 35/123 (28%)

Query: 141 PVWLNHAMHTFIFPITLAEVVLRPHSYPSKKTGLTLLAA---ASIAYI------------ 185
           P   N +  T   P+++ EV  RP S P KK   T+  +    SIA+I            
Sbjct: 3   PFQKNESKETLFSPVSIEEVPPRPPS-PPKKPSPTICGSNYPLSIAFIVVNEFCERFSYY 61

Query: 186 --SRILWLYF--------ETGTWVYPVFAKL----SLLGLAAFFS-----LSYVFIASIY 226
               +L LYF        +T T +Y  F+ L     +LG A   S      + ++++ +Y
Sbjct: 62  GMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFKTIIYLSLVY 121

Query: 227 LLG 229
           +LG
Sbjct: 122 VLG 124


>gi|222080083 guanylate cyclase 2C [Homo sapiens]
          Length = 1073

 Score = 27.7 bits (60), Expect = 9.7
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 9/90 (10%)

Query: 44  KYMTLLNLLKNRTAGFDIYQPGSFRQLLQ------TIFYGVTCLDDVLKRTKGGKDIKFL 97
           K   +L  LK+    F   Q     +LLQ      T FYG   LD ++    G  +    
Sbjct: 510 KKRVILKDLKHNDGNFTEKQKIELNKLLQIDYYNLTKFYGTVKLDTMIF---GVIEYCER 566

Query: 98  TAFRDLLFTTLAFPVSTFVFLAFWILFLYN 127
            + R++L  T+++P  TF+   F I  LY+
Sbjct: 567 GSLREVLNDTISYPDGTFMDWEFKISVLYD 596


>gi|189083762 gamma-aminobutyric acid A receptor, gamma 2 isoform 3
           precursor [Homo sapiens]
          Length = 515

 Score = 27.7 bits (60), Expect = 9.7
 Identities = 27/129 (20%), Positives = 50/129 (38%), Gaps = 16/129 (12%)

Query: 69  QLLQTIFYGVTCLDDVLKRTKGGKDIKFLTAFRDL-----LFTTLAFPVSTFVFLAFWIL 123
           +L Q  F G+    +V+K T G  D   ++ + DL      FT   +   T + +  W+ 
Sbjct: 276 RLYQFSFVGLRNTTEVVKTTSG--DYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVS 333

Query: 124 FLYNRDLIYPKVLDTVIPVWLNHAMHTFIFPITLAEVVLRPHSYPSKKTGLTLLAAASIA 183
           F  N+D          +P   +  + T +   TL+ +  +     S  T + L  +    
Sbjct: 334 FWINKD---------AVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 384

Query: 184 YISRILWLY 192
           ++   L  Y
Sbjct: 385 FVFSALVEY 393


>gi|38788135 gamma-aminobutyric acid A receptor, gamma 2 isoform 2
           precursor [Homo sapiens]
          Length = 467

 Score = 27.7 bits (60), Expect = 9.7
 Identities = 27/129 (20%), Positives = 50/129 (38%), Gaps = 16/129 (12%)

Query: 69  QLLQTIFYGVTCLDDVLKRTKGGKDIKFLTAFRDL-----LFTTLAFPVSTFVFLAFWIL 123
           +L Q  F G+    +V+K T G  D   ++ + DL      FT   +   T + +  W+ 
Sbjct: 236 RLYQFSFVGLRNTTEVVKTTSG--DYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVS 293

Query: 124 FLYNRDLIYPKVLDTVIPVWLNHAMHTFIFPITLAEVVLRPHSYPSKKTGLTLLAAASIA 183
           F  N+D          +P   +  + T +   TL+ +  +     S  T + L  +    
Sbjct: 294 FWINKD---------AVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 344

Query: 184 YISRILWLY 192
           ++   L  Y
Sbjct: 345 FVFSALVEY 353


>gi|38788155 gamma-aminobutyric acid A receptor, gamma 2 isoform 1
           precursor [Homo sapiens]
          Length = 475

 Score = 27.7 bits (60), Expect = 9.7
 Identities = 27/129 (20%), Positives = 50/129 (38%), Gaps = 16/129 (12%)

Query: 69  QLLQTIFYGVTCLDDVLKRTKGGKDIKFLTAFRDL-----LFTTLAFPVSTFVFLAFWIL 123
           +L Q  F G+    +V+K T G  D   ++ + DL      FT   +   T + +  W+ 
Sbjct: 236 RLYQFSFVGLRNTTEVVKTTSG--DYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVS 293

Query: 124 FLYNRDLIYPKVLDTVIPVWLNHAMHTFIFPITLAEVVLRPHSYPSKKTGLTLLAAASIA 183
           F  N+D          +P   +  + T +   TL+ +  +     S  T + L  +    
Sbjct: 294 FWINKD---------AVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 344

Query: 184 YISRILWLY 192
           ++   L  Y
Sbjct: 345 FVFSALVEY 353


>gi|41152093 zinc finger protein 644 isoform 1 [Homo sapiens]
          Length = 1327

 Score = 27.7 bits (60), Expect = 9.7
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 7/40 (17%)

Query: 19   FLNYYISQEGKDEVKPKILANGARWKYMTLLNLLKNRTAG 58
            FLN Y      DE KP+ L +G + + +TL+ LLKN+  G
Sbjct: 1149 FLNEY------DETKPE-LPSGKKNQSLTLIELLKNKRMG 1181


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.329    0.142    0.457 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,541,929
Number of Sequences: 37866
Number of extensions: 317823
Number of successful extensions: 826
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 821
Number of HSP's gapped (non-prelim): 12
length of query: 248
length of database: 18,247,518
effective HSP length: 100
effective length of query: 148
effective length of database: 14,460,918
effective search space: 2140215864
effective search space used: 2140215864
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.