Search of human proteins with 21361743

Search of human proteins with 21361743

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21361743 nipsnap homolog 3B [Homo sapiens]
         (247 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21361743 nipsnap homolog 3B [Homo sapiens]                         510   e-145
gi|22267436 nipsnap homolog 3A [Homo sapiens]                         454   e-128
gi|193211616 nipsnap homolog 1 [Homo sapiens]                          67   1e-11
gi|4503937 nipsnap homolog 2 [Homo sapiens]                            65   4e-11
gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens]       29   4.3  
gi|156627563 regulator of G-protein signaling 7 [Homo sapiens]         28   9.6  

>gi|21361743 nipsnap homolog 3B [Homo sapiens]
          Length = 247

 Score =  510 bits (1313), Expect = e-145
 Identities = 247/247 (100%), Positives = 247/247 (100%)

Query: 1   MLVLRSGLTKALASRTLAPQVCSSFATGPRQYDGTFYEFRTYYLKPSNMNAFMENLKKNI 60
           MLVLRSGLTKALASRTLAPQVCSSFATGPRQYDGTFYEFRTYYLKPSNMNAFMENLKKNI
Sbjct: 1   MLVLRSGLTKALASRTLAPQVCSSFATGPRQYDGTFYEFRTYYLKPSNMNAFMENLKKNI 60

Query: 61  HLRTSYSELVGFWSVEFGGRTNKVFHIWKYDNFAHRAEVRKALANCKEWQEQSIIPNLAR 120
           HLRTSYSELVGFWSVEFGGRTNKVFHIWKYDNFAHRAEVRKALANCKEWQEQSIIPNLAR
Sbjct: 61  HLRTSYSELVGFWSVEFGGRTNKVFHIWKYDNFAHRAEVRKALANCKEWQEQSIIPNLAR 120

Query: 121 IDKQETEITYLIPWSKLEKPPKEGVYELAVFQMKPGGPALWGDAFERAINAHVNLGYTKV 180
           IDKQETEITYLIPWSKLEKPPKEGVYELAVFQMKPGGPALWGDAFERAINAHVNLGYTKV
Sbjct: 121 IDKQETEITYLIPWSKLEKPPKEGVYELAVFQMKPGGPALWGDAFERAINAHVNLGYTKV 180

Query: 181 VGVFHTEYGELNRVHVLWWNESADSRAAGRHKSHEDPRVVAAVRESVNYLVSQQNMLLIP 240
           VGVFHTEYGELNRVHVLWWNESADSRAAGRHKSHEDPRVVAAVRESVNYLVSQQNMLLIP
Sbjct: 181 VGVFHTEYGELNRVHVLWWNESADSRAAGRHKSHEDPRVVAAVRESVNYLVSQQNMLLIP 240

Query: 241 ASFSPLK 247
           ASFSPLK
Sbjct: 241 ASFSPLK 247


>gi|22267436 nipsnap homolog 3A [Homo sapiens]
          Length = 247

 Score =  454 bits (1167), Expect = e-128
 Identities = 215/247 (87%), Positives = 230/247 (93%)

Query: 1   MLVLRSGLTKALASRTLAPQVCSSFATGPRQYDGTFYEFRTYYLKPSNMNAFMENLKKNI 60
           MLVLRS LT+ALASRTLAPQ+CSSFATGPRQYDG FYEFR+YYLKPS MN F+EN +KN 
Sbjct: 1   MLVLRSALTRALASRTLAPQMCSSFATGPRQYDGIFYEFRSYYLKPSKMNEFLENFEKNA 60

Query: 61  HLRTSYSELVGFWSVEFGGRTNKVFHIWKYDNFAHRAEVRKALANCKEWQEQSIIPNLAR 120
           HLRT++SELVG+WSVEFGGR N VFHIWKYDNFAHR EVRKALA  KEWQEQ +IPNLA 
Sbjct: 61  HLRTAHSELVGYWSVEFGGRMNTVFHIWKYDNFAHRTEVRKALAKDKEWQEQFLIPNLAL 120

Query: 121 IDKQETEITYLIPWSKLEKPPKEGVYELAVFQMKPGGPALWGDAFERAINAHVNLGYTKV 180
           IDKQE+EITYL+PW KLEKPPKEGVYELA FQMKPGGPALWGDAF+RA++AHVNLGYTK+
Sbjct: 121 IDKQESEITYLVPWCKLEKPPKEGVYELATFQMKPGGPALWGDAFKRAVHAHVNLGYTKL 180

Query: 181 VGVFHTEYGELNRVHVLWWNESADSRAAGRHKSHEDPRVVAAVRESVNYLVSQQNMLLIP 240
           VGVFHTEYG LNRVHVLWWNESADSRAAGRHKSHEDPRVVAAVRESVNYLVSQQNMLLIP
Sbjct: 181 VGVFHTEYGALNRVHVLWWNESADSRAAGRHKSHEDPRVVAAVRESVNYLVSQQNMLLIP 240

Query: 241 ASFSPLK 247
            SFSPLK
Sbjct: 241 TSFSPLK 247


>gi|193211616 nipsnap homolog 1 [Homo sapiens]
          Length = 284

 Score = 67.4 bits (163), Expect = 1e-11
 Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 8/216 (3%)

Query: 37  YEFRTYYLKPSNMNAF---MENLKKNIHLRTSYS-ELVGFWSVEFGGRTNKVFHIWKYDN 92
           Y+ + + +KP  ++A+    E +   +HL   Y   LVG W+  +G +   V H+W++  
Sbjct: 72  YKIQFHNVKPEYLDAYNSLTEAVLPKLHLDEDYPCSLVGNWNTWYGEQDQAV-HLWRFSG 130

Query: 93  -FAHRAEVRKALANCKEWQEQSIIPNLARIDKQETEITYLIPWSKLEKPPKEGVYELAVF 151
            +    +    L N KE+ E     +   + ++   +     W++ +      +YEL  +
Sbjct: 131 GYPALMDCMNKLKNNKEYLEFRRERSQMLLSRRNQLLLEFSFWNEPQPRMGPNIYELRTY 190

Query: 152 QMKPGGPALWGDAFERAINAHVNLGYTKVVGVFHTEYGELNRVHVLWWNESADSRAAGRH 211
           ++KPG    WG+ + RAI         + VG F ++ GEL  VH LW  +   SR   R+
Sbjct: 191 KLKPGTMIEWGNNWARAIKYRQE--NQEAVGGFFSQIGELYVVHHLWAYKDLQSREETRN 248

Query: 212 KSHEDPRVVAAVRESVNYLVSQQNMLLIPASFSPLK 247
            +         V  +V  +   ++ ++IP   SPL+
Sbjct: 249 AAWRKRGWDENVYYTVPLVRHMESRIMIPLKISPLQ 284


>gi|4503937 nipsnap homolog 2 [Homo sapiens]
          Length = 286

 Score = 65.5 bits (158), Expect = 4e-11
 Identities = 59/245 (24%), Positives = 109/245 (44%), Gaps = 12/245 (4%)

Query: 10  KALASRTLAPQVCSSFATGPRQYDGTFYEFRTYYLKPSNMNAF---MENLKKNIHLRTSY 66
           K+L  R + P+  +      ++     Y+ + + +KP  + A+    + +   IH    Y
Sbjct: 47  KSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPECLEAYNKICQEVLPKIHEDKHY 106

Query: 67  S-ELVGFWSVEFGGRTNKVFHIWKYDN-FAHRAEVRKALANCKEWQEQSIIPNLARIDKQ 124
              LVG W+  +G +   V H+W+Y+  +    EV   L   KE+ E     +   + ++
Sbjct: 107 PCTLVGTWNTWYGEQDQAV-HLWRYEGGYPALTEVMNKLRENKEFLEFRKARSDMLLSRK 165

Query: 125 ETEITYLIPWSKLEKPPKEG--VYELAVFQMKPGGPALWGDAFERAINAHVNLGYTKVVG 182
              +     W+  E  P+ G  +YEL  +Q++PG    WG+ + RAI    +    + VG
Sbjct: 166 NQLLLEFSFWN--EPVPRSGPNIYELRSYQLRPGTMIEWGNYWARAIRFRQD--GNEAVG 221

Query: 183 VFHTEYGELNRVHVLWWNESADSRAAGRHKSHEDPRVVAAVRESVNYLVSQQNMLLIPAS 242
            F ++ G+L  VH LW      +R   R+ +         V  +V  +   ++ ++IP  
Sbjct: 222 GFFSQIGQLYMVHHLWAYRDLQTREDIRNAAWHKHGWEELVYYTVPLIQEMESRIMIPLK 281

Query: 243 FSPLK 247
            SPL+
Sbjct: 282 TSPLQ 286


>gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens]
          Length = 1007

 Score = 28.9 bits (63), Expect = 4.3
 Identities = 14/61 (22%), Positives = 34/61 (55%)

Query: 54  ENLKKNIHLRTSYSELVGFWSVEFGGRTNKVFHIWKYDNFAHRAEVRKALANCKEWQEQS 113
           ++ K+N +LR ++++  G++ V  G   +K ++++ Y      + V +A  N +  QE +
Sbjct: 656 KDFKENPNLRDNWTDAEGYYRVNIGEVLDKRYNVYGYTGQGVFSNVVRARDNARANQEVA 715

Query: 114 I 114
           +
Sbjct: 716 V 716


>gi|156627563 regulator of G-protein signaling 7 [Homo sapiens]
          Length = 487

 Score = 27.7 bits (60), Expect = 9.6
 Identities = 11/16 (68%), Positives = 12/16 (75%)

Query: 33  DGTFYEFRTYYLKPSN 48
           DGTFY F+T Y  PSN
Sbjct: 104 DGTFYRFQTPYFWPSN 119


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.133    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,493,544
Number of Sequences: 37866
Number of extensions: 397532
Number of successful extensions: 789
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 771
Number of HSP's gapped (non-prelim): 6
length of query: 247
length of database: 18,247,518
effective HSP length: 100
effective length of query: 147
effective length of database: 14,460,918
effective search space: 2125754946
effective search space used: 2125754946
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.