Search of human proteins with 21359965

Search of human proteins with 21359965

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21359965 CLPTM1-like [Homo sapiens]
         (538 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21359965 CLPTM1-like [Homo sapiens]                               1099   0.0  
gi|4502897 cleft lip and palate associated transmembrane protein...   337   2e-92
gi|150418007 RAN binding protein 2 [Homo sapiens]                      32   1.5  
gi|121114287 apoptosis-stimulating protein of p53, 1 [Homo sapiens]    31   3.3  
gi|52421343 olfactory receptor, family 52, subfamily A, member 4...    29   9.5  

>gi|21359965 CLPTM1-like [Homo sapiens]
          Length = 538

 Score = 1099 bits (2843), Expect = 0.0
 Identities = 538/538 (100%), Positives = 538/538 (100%)

Query: 1   MWSGRSSFTSLVVGVFVVYVVHTCWVMYGIVYTRPCSGDANCIQPYLARRPKLQLSVYTT 60
           MWSGRSSFTSLVVGVFVVYVVHTCWVMYGIVYTRPCSGDANCIQPYLARRPKLQLSVYTT
Sbjct: 1   MWSGRSSFTSLVVGVFVVYVVHTCWVMYGIVYTRPCSGDANCIQPYLARRPKLQLSVYTT 60

Query: 61  TRSHLGAENNIDLVLNVEDFDVESKFERTVNVSVPKKTRNNGTLYAYIFLHHAGVLPWHD 120
           TRSHLGAENNIDLVLNVEDFDVESKFERTVNVSVPKKTRNNGTLYAYIFLHHAGVLPWHD
Sbjct: 61  TRSHLGAENNIDLVLNVEDFDVESKFERTVNVSVPKKTRNNGTLYAYIFLHHAGVLPWHD 120

Query: 121 GKQVHLVSPLTTYMVPKPEEINLLTGESDTQQIEAEKKPTSALDEPVSHWRPRLALNVMA 180
           GKQVHLVSPLTTYMVPKPEEINLLTGESDTQQIEAEKKPTSALDEPVSHWRPRLALNVMA
Sbjct: 121 GKQVHLVSPLTTYMVPKPEEINLLTGESDTQQIEAEKKPTSALDEPVSHWRPRLALNVMA 180

Query: 181 DNFVFDGSSLPADVHRYMKMIQLGKTVHYLPILFIDQLSNRVKDLMVINRSTTELPLTVS 240
           DNFVFDGSSLPADVHRYMKMIQLGKTVHYLPILFIDQLSNRVKDLMVINRSTTELPLTVS
Sbjct: 181 DNFVFDGSSLPADVHRYMKMIQLGKTVHYLPILFIDQLSNRVKDLMVINRSTTELPLTVS 240

Query: 241 YDKVSLGRLRFWIHMQDAVYSLQQFGFSEKDADEVKGIFVDTNLYFLALTFFVAAFHLLF 300
           YDKVSLGRLRFWIHMQDAVYSLQQFGFSEKDADEVKGIFVDTNLYFLALTFFVAAFHLLF
Sbjct: 241 YDKVSLGRLRFWIHMQDAVYSLQQFGFSEKDADEVKGIFVDTNLYFLALTFFVAAFHLLF 300

Query: 301 DFLAFKNDISFWKKKKSMIGMSTKAVLWRCFSTVVIFLFLLDEQTSLLVLVPAGVGAAIE 360
           DFLAFKNDISFWKKKKSMIGMSTKAVLWRCFSTVVIFLFLLDEQTSLLVLVPAGVGAAIE
Sbjct: 301 DFLAFKNDISFWKKKKSMIGMSTKAVLWRCFSTVVIFLFLLDEQTSLLVLVPAGVGAAIE 360

Query: 361 LWKVKKALKMTIFWRGLMPEFQFGTYSESERKTEEYDTQAMKYLSYLLYPLCVGGAVYSL 420
           LWKVKKALKMTIFWRGLMPEFQFGTYSESERKTEEYDTQAMKYLSYLLYPLCVGGAVYSL
Sbjct: 361 LWKVKKALKMTIFWRGLMPEFQFGTYSESERKTEEYDTQAMKYLSYLLYPLCVGGAVYSL 420

Query: 421 LNIKYKSWYSWLINSFVNGVYAFGFLFMLPQLFVNYKLKSVAHLPWKAFTYKAFNTFIDD 480
           LNIKYKSWYSWLINSFVNGVYAFGFLFMLPQLFVNYKLKSVAHLPWKAFTYKAFNTFIDD
Sbjct: 421 LNIKYKSWYSWLINSFVNGVYAFGFLFMLPQLFVNYKLKSVAHLPWKAFTYKAFNTFIDD 480

Query: 481 VFAFIITMPTSHRLACFRDDVVFLVYLYQRWLYPVDKRRVNEFGESYEEKATRAPHTD 538
           VFAFIITMPTSHRLACFRDDVVFLVYLYQRWLYPVDKRRVNEFGESYEEKATRAPHTD
Sbjct: 481 VFAFIITMPTSHRLACFRDDVVFLVYLYQRWLYPVDKRRVNEFGESYEEKATRAPHTD 538


>gi|4502897 cleft lip and palate associated transmembrane protein 1
           [Homo sapiens]
          Length = 669

 Score =  337 bits (863), Expect = 2e-92
 Identities = 182/476 (38%), Positives = 271/476 (56%), Gaps = 37/476 (7%)

Query: 86  FERTVNVSVPKKTRNNGTLYAYIFLHHAGVLPWHDGKQVHLVSPLTTYMVPK-------- 137
           +E    + +P+  + NG++Y +++   +G  P  D +Q  L   L T  + +        
Sbjct: 146 YEHFAELDIPQSVQQNGSIYIHVYFTKSGFHP--DPRQKALYRRLATVHMSRMINKYKRR 203

Query: 138 --PEEINLLTGESDTQQIEAEKKPTSALDEPVSHWRPRLALNVMADNFVFDGSSLPADVH 195
              +  NLLTGE++      ++       E +SHW P + +N++ D+  +   S+P  + 
Sbjct: 204 RFQKTKNLLTGETEADPEMIKRAEDYGPVEVISHWHPNITINIVDDHTPWVKGSVPPPLD 263

Query: 196 RYMKMIQLGKTVHYLPILFIDQLSNRVKDLMVINRSTTELPLTVSYDKVSLGRLRF---- 251
           +Y+K   +     Y PI++ +   N  KD   IN S   LPL VS+  +SL R +     
Sbjct: 264 QYVKFDAVSGD--YYPIIYFNDYWNLQKDYYPINESLASLPLRVSFCPLSLWRWQLYAAQ 321

Query: 252 -----WIHMQDAVYSLQQFGFSEKDADEVKGIFVDTNLYFLALTFFVAAFHLLFDFLAFK 306
                W  + D +Y       S+++ D VK   ++TN Y LALT  V+  H +F+FLAFK
Sbjct: 322 STKSPWNFLGDELYEQ-----SDEEQDSVKVALLETNPYLLALTIIVSIVHSVFEFLAFK 376

Query: 307 NDISFWKKKKSMIGMSTKAVLWRCFSTVVIFLFLLDEQTSLLVLVPAGVGAAIELWKVKK 366
           NDI FW  ++S+ G+S ++V +  F + V+ L++LD +T+ +V V   +G  I+LWK+ K
Sbjct: 377 NDIQFWNSRQSLEGLSVRSVFFGVFQSFVVLLYILDNETNFVVQVSVFIGVLIDLWKITK 436

Query: 367 ALKMTIFWR----GLMPEFQF---GTYSESERKTEEYDTQAMKYLSYLLYPLCVGGAVYS 419
            + + +       G+ P   F    TY ES  K   YD  A +YLS++L+PL    AVYS
Sbjct: 437 VMDVRLDREHRVAGIFPRLSFKDKSTYIESSTKV--YDDMAFRYLSWILFPLLGCYAVYS 494

Query: 420 LLNIKYKSWYSWLINSFVNGVYAFGFLFMLPQLFVNYKLKSVAHLPWKAFTYKAFNTFID 479
           LL +++K WYSW+++     +  FGF+ M PQLF+NYKLKSVAHLPW+  TYKA NTFID
Sbjct: 495 LLYLEHKGWYSWVLSMLYGFLLTFGFITMTPQLFINYKLKSVAHLPWRMLTYKALNTFID 554

Query: 480 DVFAFIITMPTSHRLACFRDDVVFLVYLYQRWLYPVDKRRVNEFGESYEEKATRAP 535
           D+FAF+I MP  +R+ C RDDVVF +YLYQRW+Y VD  RVNEFG S E+    AP
Sbjct: 555 DLFAFVIKMPVMYRIGCLRDDVVFFIYLYQRWIYRVDPTRVNEFGMSGEDPTAAAP 610


>gi|150418007 RAN binding protein 2 [Homo sapiens]
          Length = 3224

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 13/40 (32%), Positives = 23/40 (57%)

Query: 134  MVPKPEEINLLTGESDTQQIEAEKKPTSALDEPVSHWRPR 173
            +V  PE++ L+TGE D + + +++      D  VS W+ R
Sbjct: 2016 VVQMPEKVELVTGEEDEKVLYSQRVKLFRFDAEVSQWKER 2055


>gi|121114287 apoptosis-stimulating protein of p53, 1 [Homo sapiens]
          Length = 1090

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 5/97 (5%)

Query: 134 MVPKPEEINLLTGESDTQQIE-AEKKPTSALDEPVSHWRPRL----ALNVMADNFVFDGS 188
           +V K + ++ L  +   QQ   +E +    L E V     +L    A+    D       
Sbjct: 149 LVAKEQRLHFLKQQERRQQQSISENEKLQKLKERVEAQENKLKKIRAMRGQVDYSKIMNG 208

Query: 189 SLPADVHRYMKMIQLGKTVHYLPILFIDQLSNRVKDL 225
           +L A++ R+  M Q  K      IL +DQLS +++DL
Sbjct: 209 NLSAEIERFSAMFQEKKQEVQTAILRVDQLSQQLEDL 245


>gi|52421343 olfactory receptor, family 52, subfamily A, member 4
           [Homo sapiens]
          Length = 304

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 17/86 (19%)

Query: 432 LINSFVNGVYAFGFLFM-LPQLFVNYKLKSVAHLPWKAFTYKAFNTFIDDVFAFIITMPT 490
           ++ +F+ G   F F+ +   Q+F+     +V HLP K    K FNT I  ++ F      
Sbjct: 205 ILGAFIVGGLDFIFITLSYIQIFI-----TVFHLPLKEARLKVFNTCIPHIYVFF----- 254

Query: 491 SHRLACFRDDVVFLVYLYQRW-LYPV 515
              L  F     F ++  Q W LYP+
Sbjct: 255 QFYLLAF-----FFIFYSQIWILYPI 275


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.138    0.432 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,978,444
Number of Sequences: 37866
Number of extensions: 811923
Number of successful extensions: 2135
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2123
Number of HSP's gapped (non-prelim): 8
length of query: 538
length of database: 18,247,518
effective HSP length: 107
effective length of query: 431
effective length of database: 14,195,856
effective search space: 6118413936
effective search space used: 6118413936
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.