Search of human proteins with 20357568

Search of human proteins with 20357568

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|20357568 aminoadipate-semialdehyde
dehydrogenase-phosphopantetheinyl transferase [Homo sapiens]
         (309 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|20357568 aminoadipate-semialdehyde dehydrogenase-phosphopante...   640   0.0  
gi|205277458 G patch domain containing 3 [Homo sapiens]                30   2.1  
gi|153251811 hypothetical protein LOC55199 isoform 3 [Homo sapiens]    30   2.7  
gi|113722120 G protein-coupled receptor 98 precursor [Homo sapiens]    29   4.6  
gi|24211015 hypothetical protein LOC55199 isoform 2 [Homo sapiens]     28   7.9  

>gi|20357568 aminoadipate-semialdehyde
           dehydrogenase-phosphopantetheinyl transferase [Homo
           sapiens]
          Length = 309

 Score =  640 bits (1650), Expect = 0.0
 Identities = 309/309 (100%), Positives = 309/309 (100%)

Query: 1   MVFPAKRFCLVPSMEGVRWAFSCGTWLPSRAEWLLAVRSIQPEEKERIGQFVFARDAKAA 60
           MVFPAKRFCLVPSMEGVRWAFSCGTWLPSRAEWLLAVRSIQPEEKERIGQFVFARDAKAA
Sbjct: 1   MVFPAKRFCLVPSMEGVRWAFSCGTWLPSRAEWLLAVRSIQPEEKERIGQFVFARDAKAA 60

Query: 61  MAGRLMIRKLVAEKLNIPWNHIRLQRTAKGKPVLAKDSSNPYPNFNFNISHQGDYAVLAA 120
           MAGRLMIRKLVAEKLNIPWNHIRLQRTAKGKPVLAKDSSNPYPNFNFNISHQGDYAVLAA
Sbjct: 61  MAGRLMIRKLVAEKLNIPWNHIRLQRTAKGKPVLAKDSSNPYPNFNFNISHQGDYAVLAA 120

Query: 121 EPELQVGIDIMKTSFPGRGSIPEFFHIMKRKFTNKEWETIRSFKDEWTQLDMFYRNWALK 180
           EPELQVGIDIMKTSFPGRGSIPEFFHIMKRKFTNKEWETIRSFKDEWTQLDMFYRNWALK
Sbjct: 121 EPELQVGIDIMKTSFPGRGSIPEFFHIMKRKFTNKEWETIRSFKDEWTQLDMFYRNWALK 180

Query: 181 ESFIKAIGVGLGFELQRLEFDLSPLNLDIGQVYKETRLFLDGEEEKEWAFEESKIDEHHF 240
           ESFIKAIGVGLGFELQRLEFDLSPLNLDIGQVYKETRLFLDGEEEKEWAFEESKIDEHHF
Sbjct: 181 ESFIKAIGVGLGFELQRLEFDLSPLNLDIGQVYKETRLFLDGEEEKEWAFEESKIDEHHF 240

Query: 241 VAVALRKPDGSRHQDVPSQDDSKPTQRQFTILNFNDLMSSAVPMTPEDPSFWDCFCFTEE 300
           VAVALRKPDGSRHQDVPSQDDSKPTQRQFTILNFNDLMSSAVPMTPEDPSFWDCFCFTEE
Sbjct: 241 VAVALRKPDGSRHQDVPSQDDSKPTQRQFTILNFNDLMSSAVPMTPEDPSFWDCFCFTEE 300

Query: 301 IPIRNGTKS 309
           IPIRNGTKS
Sbjct: 301 IPIRNGTKS 309


>gi|205277458 G patch domain containing 3 [Homo sapiens]
          Length = 525

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 3/44 (6%)

Query: 10  LVPSMEGVRWAFSCGTWLPSRAEWLLAVRSIQPEEKERIGQFVF 53
           L+    G RW  S GTWLP R    L  R   P E   +G F F
Sbjct: 117 LIRMYSGRRWLDSHGTWLPGRC---LIRRLRLPTEASGLGSFPF 157


>gi|153251811 hypothetical protein LOC55199 isoform 3 [Homo sapiens]
          Length = 158

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 6   KRFCLVPSMEGVRWAFSCGTWLPS 29
           K+ C +      RW+ SCG WLP+
Sbjct: 79  KKTCCIAQKPSCRWSGSCGGWLPA 102


>gi|113722120 G protein-coupled receptor 98 precursor [Homo sapiens]
          Length = 6306

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 4/78 (5%)

Query: 216  TRLFLDGEEEKEWAFEESKIDE---HHFVAVALRKPDGSRHQDVPSQDDSKPTQRQFTIL 272
            T +FLDGE E++ + +    DE     F  V L  P G   Q V  +DD+        I+
Sbjct: 5300 TLIFLDGERERKVSVQILDDDEPEGQEFFYVFLTNPQGGA-QIVEEKDDTGFAAFAMVII 5358

Query: 273  NFNDLMSSAVPMTPEDPS 290
              +DL +  +  + E  S
Sbjct: 5359 TGSDLHNGIIGFSEESQS 5376


>gi|24211015 hypothetical protein LOC55199 isoform 2 [Homo
          sapiens]
          Length = 131

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query: 6  KRFCLVPSMEGVRWAFSCGTWLPS 29
          ++ C +      RW+ SCG WLP+
Sbjct: 52 QKTCCIAQKPSCRWSGSCGGWLPA 75


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.137    0.429 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,609,570
Number of Sequences: 37866
Number of extensions: 564713
Number of successful extensions: 1240
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1237
Number of HSP's gapped (non-prelim): 6
length of query: 309
length of database: 18,247,518
effective HSP length: 102
effective length of query: 207
effective length of database: 14,385,186
effective search space: 2977733502
effective search space used: 2977733502
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.